C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypeptide N-acetylgalactosaminyltransferase-like 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174473 GALNTL6 9606 + 4:171812254-173041559 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000457021 GALNTL6-006 172266154-172669207 processed_transcript
  ENST00000504379 GALNTL6-004 171813523-171816191 processed_transcript
  ENST00000506823 GALNTL6-001 171813503-173041559 protein_coding
  ENST00000508122 GALNTL6-005 172052445-173040100 protein_coding
  ENST00000511251 GALNTL6-002 171812254-171815579 protein_coding
  ENST00000513061 GALNTL6-003 171813523-171816353 processed_transcript
  ENST00000616459 GALNTL6-201 172809360-173040100 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000504379ENST00000506823ENST00000508122ENST00000511251ENST00000616459
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000504379 N/A 0.397±0.00 N/A N/A 0.159±0.00 0.037±0.00 0.063±0.05 N/A N/A N/A N/A
ENST00000506823 N/A 0.408±0.00 N/A 0.049±0.02 0.033±0.00 N/A 0.030±0.00 0.015±0.00 0.007±0.00 N/A N/A
ENST00000508122 N/A 0.780±0.00 N/A 0.017±0.00 N/A N/A 0.086±0.00 N/A N/A N/A 0.514±0.00
ENST00000511251 0.317±0.00 0.374±0.00 0.043±0.04 N/A 0.012±0.00 0.019±0.00 N/A 0.044±0.00 0.026±0.01 N/A 0.202±0.06
ENST00000616459 N/A N/A N/A 0.030±0.00 N/A N/A N/A 0.053±0.00 0.018±0.00 0.040±0.00 0.358±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007Y CIL_00007Y_0002 CGP 4:171812254-173323967

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040048 GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 protein_coding Danio_rerio
ENSMUSG00000096914 Galntl6 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6 protein_coding Mus_musculus

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