C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polypeptide N-acetylgalactosaminyltransferase-like 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506823 GALNTL6-001 ENSG00000174473 9606 + 4:171813503-173041559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungOvaryENST00000506823
Transcript ID Brain Colon Heart Liver Lung Ovary
ENST00000506823 0.408±0.00 0.049±0.02 0.033±0.00 0.030±0.00 0.015±0.00 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007Y CIL_00007Y_0002 CGP 4:171812254-173323967

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098757 Galntl6-202 protein_coding Mus_musculus 0 2276
ENSMUST00000077447 Galntl6-001 protein_coding Mus_musculus 0 911
ENSMUST00000188531 Galntl6-201 protein_coding Mus_musculus 0 590
ENSMUST00000146513 Galntl6-002 nonsense_mediated_decay Mus_musculus 0 590

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