C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat and Ig domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000174482 LINGO2 9606 - 9:27948078-28670286 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308675 LINGO2-201 27948086-28670285 protein_coding
  ENST00000379992 LINGO2-001 27948078-28670285 protein_coding
  ENST00000493941 LINGO2-002 28080605-28295331 processed_transcript
  ENST00000613945 LINGO2-202 27948086-28670286 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000308675ENST00000379992ENST00000493941ENST00000613945
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000308675 N/A N/A 0.238±0.00 N/A N/A N/A N/A N/A N/A N/A 0.378±0.00 N/A
ENST00000379992 N/A N/A 1.433±0.40 N/A N/A 0.008±0.00 0.147±0.00 N/A N/A 0.125±0.02 0.137±0.00 1.122±0.00
ENST00000493941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.957±0.00
ENST00000613945 0.009±0.00 0.055±0.00 0.357±0.00 0.049±0.00 0.120±0.00 0.016±0.00 N/A 0.206±0.00 0.077±0.00 0.150±0.00 0.137±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061K CIL_00061K_0001 CGP 9:27546545-28670286

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069970 lingo2 leucine rich repeat and Ig domain containing 2 protein_coding Danio_rerio
ENSDARG00000074535 LINGO2 (2 of 2) leucine rich repeat and Ig domain containing 2 protein_coding Danio_rerio
ENSMUSG00000045083 Lingo2 leucine rich repeat and Ig domain containing 2 protein_coding Mus_musculus

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