C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat and Ig domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045083 Lingo2 10090 - 4:35706647-36951747 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000065173 Lingo2-003 35707406-35845204 protein_coding
  ENSMUST00000098151 Lingo2-002 35707406-36136463 protein_coding
  ENSMUST00000108122 Lingo2-001 35707406-36951223 protein_coding
  ENSMUST00000108124 Lingo2-201 35707843-36056726 protein_coding
  ENSMUST00000124999 Lingo2-005 36056724-36950486 processed_transcript
  ENSMUST00000125128 Lingo2-007 36951100-36951747 processed_transcript
  ENSMUST00000127372 Lingo2-006 36718557-36950467 processed_transcript
  ENSMUST00000144170 Lingo2-004 36718802-36950489 processed_transcript
  ENSMUST00000145615 Lingo2-008 36715820-36951744 processed_transcript
  ENSMUST00000164772 Lingo2-202 35706647-35845204 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000065173ENSMUST00000098151ENSMUST00000108122ENSMUST00000108124ENSMUST00000124999ENSMUST00000125128ENSMUST00000145615ENSMUST00000164772
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000065173 0.056±0.03 N/A N/A N/A N/A N/A N/A N/A 0.036±0.03 N/A N/A
ENSMUST00000098151 N/A N/A N/A N/A N/A 0.045±0.01 0.001±0.00 N/A 0.095±0.08 N/A N/A
ENSMUST00000108122 N/A 0.006±0.00 1.880±1.09 N/A N/A N/A 0.003±0.00 N/A N/A 0.012±0.00 0.036±0.00
ENSMUST00000108124 N/A N/A 2.330±1.42 0.047±0.00 0.011±0.00 0.062±0.04 0.009±0.01 N/A 0.075±0.06 0.011±0.01 0.046±0.03
ENSMUST00000124999 N/A N/A N/A N/A N/A N/A 0.015±0.00 0.241±0.00 0.103±0.00 N/A N/A
ENSMUST00000125128 N/A 0.047±0.00 N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145615 N/A 0.002±0.00 2.102±0.00 N/A N/A 0.026±0.01 0.004±0.00 N/A N/A N/A N/A
ENSMUST00000164772 N/A N/A 0.937±0.53 N/A N/A N/A 0.004±0.00 N/A 0.007±0.00 0.010±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061K CIL_00061K_0002 CGP 4:35191285-36951747

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069970 lingo2 leucine rich repeat and Ig domain containing 2 protein_coding Danio_rerio
ENSDARG00000074535 LINGO2 (2 of 2) leucine rich repeat and Ig domain containing 2 protein_coding Danio_rerio
ENSG00000174482 LINGO2 leucine rich repeat and Ig domain containing 2 protein_coding Homo_sapiens

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