C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: von Willebrand factor A domain containing 3A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175267 VWA3A 9606 + 16:22092538-22156966 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299840 VWA3A-004 22121024-22156100 nonsense_mediated_decay
  ENST00000389398 VWA3A-001 22092542-22156966 protein_coding
  ENST00000562340 VWA3A-008 22092538-22110912 retained_intron
  ENST00000563389 VWA3A-010 22131712-22138552 protein_coding
  ENST00000563755 VWA3A-003 22146272-22155902 protein_coding
  ENST00000566668 VWA3A-007 22092541-22138425 retained_intron
  ENST00000567131 VWA3A-009 22092540-22110979 protein_coding
  ENST00000568328 VWA3A-006 22092542-22138397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000299840ENST00000389398ENST00000562340ENST00000563389ENST00000563755ENST00000566668ENST00000568328
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000299840 0.007±0.00 0.031±0.00 0.552±0.00 N/A 0.030±0.00 0.071±0.00 0.022±0.00 N/A N/A N/A N/A N/A
ENST00000389398 N/A 0.023±0.00 N/A 0.022±0.00 0.022±0.00 0.058±0.00 N/A N/A N/A 0.264±0.28 0.010±0.00 N/A
ENST00000562340 N/A N/A 0.824±0.00 N/A N/A N/A N/A 0.318±0.00 N/A 0.134±0.00 N/A N/A
ENST00000563389 0.087±0.00 N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A 0.251±0.00 N/A N/A
ENST00000563755 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 0.150±0.00 0.067±0.00 N/A N/A
ENST00000566668 N/A N/A N/A 0.078±0.00 0.127±0.00 N/A N/A N/A N/A N/A 0.048±0.00 0.427±0.00
ENST00000568328 N/A N/A N/A 0.117±0.00 N/A 0.065±0.00 N/A 0.024±0.00 N/A N/A N/A 2.172±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003F2 CIL_0003F2_0001 CGP 16:22007638-22156966
CIL_0000AA CIL_0000AA_0002 CGP 16:22092538-22191754

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087210 VWA3A von Willebrand factor A domain containing 3A protein_coding Danio_rerio
ENSMUSG00000030889 Vwa3a von Willebrand factor A domain containing 3A protein_coding Mus_musculus

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