C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000AA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087210-ENSDARG00000059914 CGP 7955 3:59202307-59288982
GeneTranscriptPositionBiotype
ENSDARG00000059914 (sdr42e2)
short chain dehydrogenase/reductase family 42E, member 2 		ENSDART00000083850 (sdr42e2-201) 59251179-59288982 protein_coding
ENSDART00000155759 (sdr42e2-001) 59248084-59285602 protein_coding
ENSDARG00000087210 (VWA3A)
von Willebrand factor A domain containing 3A 		ENSDART00000125846 (VWA3A-201) 59202307-59240617 protein_coding
ENSDART00000155715 (VWA3A-001) 59223486-59241285 protein_coding
CIL_0000AA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175267-ENSG00000183921 CGP 9606 16:22092538-22191754
GeneTranscriptPositionBiotype
ENSG00000175267 (VWA3A)
von Willebrand factor A domain containing 3A 		ENST00000299840 (VWA3A-004) 22121024-22156100 nonsense_mediated_decay
ENST00000389398 (VWA3A-001) 22092542-22156966 protein_coding
ENST00000562340 (VWA3A-008) 22092538-22110912 retained_intron
ENST00000563389 (VWA3A-010) 22131712-22138552 protein_coding
ENST00000563755 (VWA3A-003) 22146272-22155902 protein_coding
ENST00000566668 (VWA3A-007) 22092541-22138425 retained_intron
ENST00000567131 (VWA3A-009) 22092540-22110979 protein_coding
ENST00000568328 (VWA3A-006) 22092542-22138397 protein_coding
ENSG00000183921 (SDR42E2)
short chain dehydrogenase/reductase family 42E, member 2 		ENST00000602312 (SDR42E2-001) 22165583-22191754 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AA_0001ENSDARG00000059914ENSDART00000083850ENSDART00000155759ENSDARG00000087210ENSDART00000125846ENSDART00000155715CIL_0000AA_0002ENSG00000175267ENST00000299840ENST00000389398ENST00000562340ENST00000563389ENST00000563755ENST00000566668ENST00000567131ENST00000568328ENSG00000183921ENST00000602312
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AA_0001ENSDARG00000059914ENSDART00000083850ENSDARG00000087210ENSDART00000125846ENSDART00000155715CIL_0000AA_0002ENSG00000175267ENST00000299840ENST00000389398ENST00000562340ENST00000563389ENST00000563755ENST00000566668ENST00000568328ENSG00000183921ENST00000602312
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059914 ENSDART00000083850 N/A N/A N/A 0.352±0.30 N/A N/A 0.155±0.11 0.055±0.00 0.194±0.00 N/A 0.269±0.00 N/A N/A N/A
ENSDART00000155759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000087210 ENSDART00000125846 N/A N/A N/A 0.664±0.08 N/A N/A 0.026±0.00 0.855±0.80 0.016±0.00 N/A 0.062±0.00 N/A N/A N/A
ENSDART00000155715 N/A N/A N/A 0.312±0.05 N/A N/A 0.061±0.05 0.123±0.09 N/A N/A 0.057±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175267 ENST00000299840 0.007±0.00 N/A 0.031±0.00 0.552±0.00 N/A 0.030±0.00 0.071±0.00 0.022±0.00 N/A N/A N/A N/A N/A N/A
ENST00000389398 N/A N/A 0.023±0.00 N/A 0.022±0.00 0.022±0.00 0.058±0.00 N/A N/A N/A N/A 0.264±0.28 0.010±0.00 N/A
ENST00000562340 N/A N/A N/A 0.824±0.00 N/A N/A N/A N/A 0.318±0.00 N/A N/A 0.134±0.00 N/A N/A
ENST00000563389 0.087±0.00 N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A N/A 0.251±0.00 N/A N/A
ENST00000563755 N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A 0.150±0.00 0.067±0.00 N/A N/A
ENST00000566668 N/A N/A N/A N/A 0.078±0.00 0.127±0.00 N/A N/A N/A N/A N/A N/A 0.048±0.00 0.427±0.00
ENST00000567131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568328 N/A N/A N/A N/A 0.117±0.00 N/A 0.065±0.00 N/A 0.024±0.00 N/A N/A N/A N/A 2.172±0.00
ENSG00000183921 ENST00000602312 0.010±0.00 0.032±0.00 N/A 0.106±0.08 0.090±0.08 0.043±0.00 N/A 0.012±0.00 0.092±0.08 0.174±0.10 N/A N/A N/A 0.113±0.00

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