C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5-phosphohydroxy-L-lysine phospho-lyase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175309 PHYKPL 9606 - 5:178208497-178232791 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308158 PHYKPL-001 178208497-178232785 protein_coding
  ENST00000323594 PHYKPL-011 178224449-178232630 protein_coding
  ENST00000393488 PHYKPL-016 178208623-178222476 nonsense_mediated_decay
  ENST00000474052 PHYKPL-003 178208587-178232790 nonsense_mediated_decay
  ENST00000476170 PHYKPL-010 178228125-178232571 protein_coding
  ENST00000476487 PHYKPL-002 178210968-178225010 retained_intron
  ENST00000481436 PHYKPL-006 178208499-178226079 retained_intron
  ENST00000481811 PHYKPL-008 178208584-178230940 processed_transcript
  ENST00000489262 PHYKPL-009 178208584-178232791 retained_intron
  ENST00000493197 PHYKPL-004 178208639-178232768 nonsense_mediated_decay
  ENST00000494126 PHYKPL-005 178208644-178232773 retained_intron
  ENST00000504096 PHYKPL-014 178223388-178224496 retained_intron
  ENST00000506001 PHYKPL-018 178224512-178230306 retained_intron
  ENST00000506045 PHYKPL-015 178211890-178222934 nonsense_mediated_decay
  ENST00000510913 PHYKPL-013 178222476-178230073 nonsense_mediated_decay
  ENST00000510991 PHYKPL-017 178208654-178230320 retained_intron
  ENST00000511716 PHYKPL-019 178226466-178232541 processed_transcript
  ENST00000514424 PHYKPL-012 178224331-178230049 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000474052ENST00000476487ENST00000481811
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000474052 N/A N/A N/A N/A N/A 4.051±0.00 N/A N/A N/A N/A
ENST00000476487 19.283±0.00 N/A N/A 7.775±0.00 13.909±0.00 13.810±0.00 16.832±0.00 11.356±0.00 13.158±0.00 10.899±2.38
ENST00000481811 N/A 2.070±0.00 3.861±0.00 5.470±0.00 N/A 1.702±0.00 N/A 0.972±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0008152 IEA metabolic process
GO:0008483 IEA transaminase activity
GO:0016829 IEA lyase activity
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040566 PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase protein_coding Danio_rerio
ENSMUSG00000020359 Phykpl 5-phosphohydroxy-L-lysine phospholyase protein_coding Mus_musculus

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