C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-phosphohydroxy-L-lysine phospho-lyase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476487 PHYKPL-002 ENSG00000175309 9606 - 5:178210968-178225010 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyLiverMuscleOvaryPlacentaENST00000476487
Transcript ID Adrenal Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000476487 19.283±0.00 7.775±0.00 13.909±0.00 13.810±0.00 16.832±0.00 11.356±0.00 13.158±0.00 10.899±2.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020625 Phykpl-004 protein_coding Mus_musculus 0 863
ENSMUST00000167797 Phykpl-001 protein_coding Mus_musculus 0 863
ENSMUST00000156128 Phykpl-003 retained_intron Mus_musculus 0 675
ENSMUST00000074669 Hnrnpab-001 protein_coding Mus_musculus 0 329
ENSMUST00000169995 Phykpl-008 retained_intron Mus_musculus 0 329
ENSMUST00000101249 Hnrnpab-002 protein_coding Mus_musculus 0 307
ENSMUST00000169823 Phykpl-007 retained_intron Mus_musculus 0 268
ENSMUST00000101250 Phykpl-005 nonsense_mediated_decay Mus_musculus 5e-24 117

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