C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 5-phosphohydroxy-L-lysine phospholyase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020359 Phykpl 10090 + 11:51584757-51604489 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020625 Phykpl-004 51584789-51601328 protein_coding
  ENSMUST00000101250 Phykpl-005 51584757-51603254 nonsense_mediated_decay
  ENSMUST00000109105 Phykpl-002 51584811-51593306 retained_intron
  ENSMUST00000156128 Phykpl-003 51584803-51597010 retained_intron
  ENSMUST00000164864 Phykpl-006 51584807-51587317 retained_intron
  ENSMUST00000167797 Phykpl-001 51584757-51604489 protein_coding
  ENSMUST00000169823 Phykpl-007 51591447-51593881 retained_intron
  ENSMUST00000169995 Phykpl-008 51599267-51601067 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverENSMUST00000020625
Transcript ID Adipose Breast Heart Kidney Liver
ENSMUST00000020625 10.788±0.01 11.460±1.80 5.481±0.00 12.154±1.41 10.442±0.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008483 IEA transaminase activity
GO:0016829 IEA lyase activity
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040566 PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase protein_coding Danio_rerio
ENSG00000175309 PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase protein_coding Homo_sapiens

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