C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TMEM9 domain family, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175348 TMEM9B 9606 - 11:8947294-8965011 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309134 TMEM9B-004 8947294-8964441 protein_coding
  ENST00000525069 TMEM9B-002 8947501-8965011 protein_coding
  ENST00000528117 TMEM9B-003 8952692-8964402 protein_coding
  ENST00000530136 TMEM9B-005 8953262-8964180 protein_coding
  ENST00000534025 TMEM9B-001 8947294-8964773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309134ENST00000525069ENST00000534025
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309134 10.693±0.00 17.195±0.00 N/A 17.510±9.95 9.873±0.00 5.985±3.52 13.533±0.00 16.736±15.79 5.135±4.21 9.968±6.34 8.061±0.00 10.748±3.07 18.626±6.04 12.433±5.25
ENST00000525069 6.138±0.00 7.799±0.00 N/A 5.704±0.00 2.690±1.52 3.615±1.18 3.370±0.00 9.517±0.00 N/A 2.177±0.00 1.949±0.00 5.541±0.00 3.395±0.00 4.182±1.45
ENST00000534025 N/A N/A 1.306±0.00 4.196±0.52 2.836±0.42 2.520±0.60 2.264±0.41 2.689±0.00 2.808±0.00 5.706±1.44 2.875±0.09 7.000±3.52 7.255±1.69 2.772±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q2 CIL_0008Q2_0001 VISTA 11:8432154-9033661
CIL_0002U3 CIL_0002U3_0001 CGP 11:8937579-8965011
CIL_00049B CIL_00049B_0001 CGP 11:8947294-9004049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IMP signal transducer activity
GO:0007165 IMP signal transduction
GO:0016021 IEA integral component of membrane
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025693 tmem9b TMEM9 domain family, member B protein_coding Danio_rerio
ENSMUSG00000031021 Tmem9b TMEM9 domain family, member B protein_coding Mus_musculus

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