C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TMEM9 domain family, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534025 TMEM9B-001 ENSG00000175348 9606 - 11:8947294-8964773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000534025
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000534025 1.306±0.00 4.196±0.52 2.836±0.42 2.520±0.60 2.264±0.41 2.689±0.00 2.808±0.00 5.706±1.44 2.875±0.09 7.000±3.52 7.255±1.69 2.772±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q2 CIL_0008Q2_0001 VISTA 11:8432154-9033661
CIL_0002U3 CIL_0002U3_0001 CGP 11:8937579-8965011
CIL_00049B CIL_00049B_0001 CGP 11:8947294-9004049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IMP signal transducer activity
GO:0007165 IMP signal transduction
GO:0016021 IEA integral component of membrane
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033333 Tmem9b-001 protein_coding Mus_musculus 0 1214
ENSMUST00000118571 Tmem9b-002 protein_coding Mus_musculus 0 1103
ENSDART00000028887 tmem9b-201 protein_coding Danio_rerio 0 267
ENSMUST00000128043 Tmem9b-003 protein_coding Mus_musculus 0 255

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