C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002U3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176009-ENSG00000175348 CGP 9606 11:8937579-8965011
GeneTranscriptPositionBiotype
ENSG00000175348 (TMEM9B)
TMEM9 domain family, member B 		ENST00000309134 (TMEM9B-004) 8947294-8964441 protein_coding
ENST00000525069 (TMEM9B-002) 8947501-8965011 protein_coding
ENST00000528117 (TMEM9B-003) 8952692-8964402 protein_coding
ENST00000530136 (TMEM9B-005) 8953262-8964180 protein_coding
ENST00000534025 (TMEM9B-001) 8947294-8964773 protein_coding
ENSG00000176009 (ASCL3)
achaete-scute family bHLH transcription factor 3 		ENST00000531618 (ASCL3-001) 8937579-8938211 protein_coding
ENSG00000223080 (Y_RNA)
Y RNA 		ENST00000411148 (Y_RNA.1-826) 8943380-8943467 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0002U3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035951-ENSMUSG00000031021 CGP 10090 7:109727465-109752875
GeneTranscriptPositionBiotype
ENSMUSG00000031021 (Tmem9b)
TMEM9 domain family, member B 		ENSMUST00000033333 (Tmem9b-001) 109735834-109752279 protein_coding
ENSMUST00000118571 (Tmem9b-002) 109735836-109752875 protein_coding
ENSMUST00000128043 (Tmem9b-003) 109745354-109752246 protein_coding
ENSMUSG00000035951 (Ascl3)
achaete-scute complex homolog 3 (Drosophila) 		ENSMUST00000035372 (Ascl3-201) 109727465-109731732 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U3_0001ENSG00000175348ENST00000309134ENST00000525069ENST00000528117ENST00000530136ENST00000534025ENSG00000176009ENST00000531618ENSG00000223080ENST00000411148CIL_0002U3_0002ENSMUSG00000031021ENSMUST00000033333ENSMUST00000118571ENSMUST00000128043ENSMUSG00000035951ENSMUST00000035372
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U3_0001ENSG00000175348ENST00000309134ENST00000525069ENST00000534025ENSG00000176009ENST00000531618ENSG00000223080ENST00000411148CIL_0002U3_0002ENSMUSG00000031021ENSMUST00000033333ENSMUST00000118571ENSMUST00000128043ENSMUSG00000035951ENSMUST00000035372
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175348 ENST00000309134 10.693±0.00 17.195±0.00 N/A 17.510±9.95 9.873±0.00 5.985±3.52 13.533±0.00 16.736±15.79 5.135±4.21 9.968±6.34 8.061±0.00 10.748±3.07 18.626±6.04 12.433±5.25
ENST00000525069 6.138±0.00 7.799±0.00 N/A 5.704±0.00 2.690±1.52 3.615±1.18 3.370±0.00 9.517±0.00 N/A 2.177±0.00 1.949±0.00 5.541±0.00 3.395±0.00 4.182±1.45
ENST00000528117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534025 N/A N/A 1.306±0.00 4.196±0.52 2.836±0.42 2.520±0.60 2.264±0.41 2.689±0.00 2.808±0.00 5.706±1.44 2.875±0.09 7.000±3.52 7.255±1.69 2.772±0.16
ENSG00000176009 ENST00000531618 0.056±0.00 0.116±0.00 N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A 0.387±0.37 N/A 0.267±0.19
ENSG00000223080 ENST00000411148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.452±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031021 ENSMUST00000033333 27.397±1.69 27.192±5.59 21.942±3.25 19.813±6.08 30.824±2.27 41.235±5.32 18.918±0.37 40.832±1.93 13.750±2.18 41.397±0.90 17.885±1.45 19.588±5.52 30.743±12.46 13.298±5.92
ENSMUST00000118571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.620±0.00 1.847±0.00 N/A 1.261±0.73
ENSMUST00000128043 N/A 10.475±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035951 ENSMUST00000035372 0.164±0.15 0.421±0.16 0.077±0.01 0.035±0.00 0.210±0.12 0.236±0.09 0.046±0.01 0.470±0.23 0.056±0.05 0.253±0.07 0.051±0.00 0.179±0.07 0.495±0.41 0.419±0.25

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