C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium binding protein 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175544 CABP4 9606 + 11:67452406-67460313 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325656 CABP4-001 67455347-67460313 protein_coding
  ENST00000438189 CABP4-002 67452415-67459228 protein_coding
  ENST00000538060 CABP4-004 67452406-67455699 processed_transcript
  ENST00000542025 CABP4-005 67452419-67455790 processed_transcript
  ENST00000542233 CABP4-007 67452738-67453669 processed_transcript
  ENST00000545040 CABP4-003 67452436-67453440 retained_intron
  ENST00000545777 CABP4-006 67455403-67457649 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325656ENST00000438189ENST00000542025ENST00000542233ENST00000545040
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325656 7.096±0.00 0.188±0.18 0.098±0.06 0.080±0.00 0.019±0.00 N/A 0.153±0.14 N/A N/A 0.169±0.00 0.193±0.04 N/A
ENST00000438189 N/A N/A 0.082±0.00 N/A 0.138±0.00 0.244±0.00 N/A N/A 0.162±0.05 0.861±0.00 0.288±0.04 N/A
ENST00000542025 N/A N/A 0.377±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542233 N/A 0.392±0.00 N/A N/A N/A 0.651±0.00 N/A 0.671±0.00 N/A N/A N/A 0.409±0.00
ENST00000545040 N/A 0.212±0.00 0.362±0.00 N/A 0.136±0.00 N/A N/A N/A N/A 0.127±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 TAS:IEA calcium ion binding
GO:0005576 NAS extracellular region
GO:0005829 IDA cytosol
GO:0007165 NAS signal transduction
GO:0007601 IMP visual perception
GO:0007602 IEA phototransduction
GO:0008594 IEA photoreceptor cell morphogenesis
GO:0043195 TAS terminal bouton
GO:0045202 TAS synapse
GO:0046549 IEA retinal cone cell development
GO:0060040 IEA retinal bipolar neuron differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008866 cabp4 calcium binding protein 4 protein_coding Danio_rerio
ENSMUSG00000024842 Cabp4 calcium binding protein 4 protein_coding Mus_musculus

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