C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438189 CABP4-002 ENSG00000175544 9606 + 11:67452415-67459228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyMuscleOvaryPlacentaENST00000438189
Transcript ID Breast Heart Kidney Muscle Ovary Placenta
ENST00000438189 0.082±0.00 0.138±0.00 0.244±0.00 0.162±0.05 0.861±0.00 0.288±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 TAS:IEA calcium ion binding
GO:0005576 NAS extracellular region
GO:0005829 IDA cytosol
GO:0007165 NAS signal transduction
GO:0007601 IMP visual perception
GO:0043195 TAS terminal bouton
GO:0045202 TAS synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151775 Cabp1-005 processed_transcript Mus_musculus 2e-30 137
ENSMUST00000145197 Cabp1-002 nonsense_mediated_decay Mus_musculus 2e-30 137
ENSMUST00000112112 Cabp1-003 protein_coding Mus_musculus 2e-30 137
ENSMUST00000112109 Cabp1-006 protein_coding Mus_musculus 2e-30 137
ENSMUST00000112113 Cabp1-004 protein_coding Mus_musculus 2e-30 137
ENSMUST00000031519 Cabp1-001 protein_coding Mus_musculus 2e-30 137
ENSDART00000018528 cabp5a-201 protein_coding Danio_rerio 0.00000000000003 84
ENSDART00000144067 cabp5a-001 protein_coding Danio_rerio 0.00000000000003 84

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