C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CTD nuclear envelope phosphatase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175826 CTDNEP1 9606 - 17:7243591-7252491 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318988 CTDNEP1-003 7243839-7251961 protein_coding
  ENST00000570380 CTDNEP1-008 7246254-7251330 nonsense_mediated_decay
  ENST00000570385 CTDNEP1-010 7246034-7246678 retained_intron
  ENST00000570484 CTDNEP1-011 7244141-7244838 retained_intron
  ENST00000570828 CTDNEP1-012 7243591-7247339 protein_coding
  ENST00000571409 CTDNEP1-006 7246356-7252474 protein_coding
  ENST00000572043 CTDNEP1-007 7244039-7252491 protein_coding
  ENST00000573600 CTDNEP1-002 7243618-7252081 protein_coding
  ENST00000574205 CTDNEP1-004 7243650-7251682 nonsense_mediated_decay
  ENST00000574322 CTDNEP1-001 7243591-7251675 protein_coding
  ENST00000575783 CTDNEP1-005 7244555-7252054 protein_coding
  ENST00000576613 CTDNEP1-009 7244232-7251286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLungMuscleOvaryPlacentaENST00000318988ENST00000570828ENST00000574322
Transcript ID Adipose Adrenal Brain Breast Colon Lung Muscle Ovary Placenta
ENST00000318988 N/A N/A N/A 11.032±0.00 N/A N/A 42.479±26.14 91.623±0.00 141.153±3.50
ENST00000570828 N/A N/A N/A N/A N/A N/A N/A N/A 76.562±0.00
ENST00000574322 41.325±0.00 45.965±0.00 10.524±0.00 N/A 83.690±0.00 4.946±0.00 77.456±0.00 102.262±26.47 70.632±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004722 IMP protein serine/threonine phosphatase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006470 IDA protein dephosphorylation
GO:0006998 IDA nuclear envelope organization
GO:0007276 IEA gamete generation
GO:0007498 IEA mesoderm development
GO:0010867 IGI positive regulation of triglyceride biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0031965 IDA nuclear membrane
GO:0034504 IDA protein localization to nucleus
GO:0071595 IDA Nem1-Spo7 phosphatase complex
GO:0090263 IEA positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016519 ctdnep1a CTD nuclear envelope phosphatase 1a protein_coding Danio_rerio
ENSDARG00000035781 ctdnep1b CTD nuclear envelope phosphatase 1b protein_coding Danio_rerio
ENSMUSG00000018559 Ctdnep1 CTD nuclear envelope phosphatase 1 protein_coding Mus_musculus

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