C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD nuclear envelope phosphatase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000574205 CTDNEP1-004 ENSG00000175826 9606 - 17:7243650-7251682 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004722 IMP protein serine/threonine phosphatase activity
GO:0005515 IPI:IEA protein binding
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006470 IDA protein dephosphorylation
GO:0006998 IDA nuclear envelope organization
GO:0010867 IGI positive regulation of triglyceride biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0031965 IDA nuclear membrane
GO:0034504 IDA protein localization to nucleus
GO:0071595 IDA Nem1-Spo7 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108593 Ctdnep1-001 protein_coding Mus_musculus 0 1640
ENSMUST00000165001 Gm6872-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000141623 Ctdnep1-005 protein_coding Mus_musculus 0 817
ENSMUST00000131531 Ctdnep1-002 retained_intron Mus_musculus 0 704
ENSMUST00000138246 Ctdnep1-004 retained_intron Mus_musculus 0 350
ENSMUST00000152226 Ctdnep1-003 processed_transcript Mus_musculus 0 346

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