C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lymphocyte antigen 6 complex, locus H
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176956 LY6H 9606 - 8:143157914-143160711 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342752 LY6H-001 143157914-143160328 protein_coding
  ENST00000414417 LY6H-002 143157914-143160711 protein_coding
  ENST00000430474 LY6H-003 143157914-143160040 protein_coding
  ENST00000479685 LY6H-004 143157914-143160309 retained_intron
  ENST00000615409 LY6H-201 143157915-143160636 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000342752ENST00000430474ENST00000479685
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000342752 0.068±0.00 0.109±0.00 30.287±18.32 0.334±0.00 2.134±0.00 0.036±0.00 0.481±0.00 1.181±0.00 0.065±0.00 2.050±0.64 0.383±0.00 N/A
ENST00000430474 N/A N/A 6.173±0.00 N/A 0.086±0.00 N/A N/A N/A N/A 0.610±0.18 0.270±0.22 5.770±1.26
ENST00000479685 N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A 0.295±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NV CIL_0002NV_0001 CGP 8:143080457-143160711
CIL_0002NW CIL_0002NW_0001 CGP 8:143157914-143217170

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0007399 TAS nervous system development
GO:0009887 TAS organ morphogenesis
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022577 Ly6h lymphocyte antigen 6 complex, locus H protein_coding Mus_musculus

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