C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Parkinson disease 7 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177225 PDDC1 9606 - 11:767220-777488 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319863 PDDC1-003 767225-777484 protein_coding
  ENST00000354286 PDDC1-001 767225-777488 nonsense_mediated_decay
  ENST00000397472 PDDC1-006 767222-777471 protein_coding
  ENST00000465313 PDDC1-010 767220-771427 protein_coding
  ENST00000524550 PDDC1-014 770470-777475 protein_coding
  ENST00000526325 PDDC1-016 767228-777487 protein_coding
  ENST00000526650 PDDC1-017 767228-774026 protein_coding
  ENST00000528309 PDDC1-012 767222-774068 protein_coding
  ENST00000528602 PDDC1-008 773330-777484 retained_intron
  ENST00000529362 PDDC1-007 775065-777179 processed_transcript
  ENST00000529966 PDDC1-018 770812-777483 processed_transcript
  ENST00000530209 PDDC1-013 770698-772614 retained_intron
  ENST00000532320 PDDC1-004 770550-777485 retained_intron
  ENST00000532839 PDDC1-015 771035-777484 processed_transcript
  ENST00000533960 PDDC1-009 770844-771370 retained_intron
  ENST00000534603 PDDC1-005 770812-777483 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319863ENST00000354286ENST00000528309
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319863 4.670±0.00 9.966±0.00 3.824±2.66 9.923±0.00 2.587±0.00 1.610±1.27 13.141±0.00 1.873±1.37 2.170±1.79 0.895±0.00 8.863±4.43 8.208±1.26 7.474±0.47
ENST00000354286 N/A N/A N/A N/A N/A N/A 2.211±0.00 N/A N/A 0.711±0.00 0.354±0.00 N/A N/A
ENST00000528309 N/A N/A N/A N/A N/A N/A N/A 4.666±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OK CIL_0003OK_0001 CGP 11:747329-777488
CIL_0003OJ CIL_0003OJ_0001 CGP 11:767220-790123

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053609 pddc1 Parkinson disease 7 domain containing 1 protein_coding Danio_rerio
ENSMUSG00000051007 Pddc1 Parkinson disease 7 domain containing 1 protein_coding Mus_musculus

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