C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003OJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177225-ENSG00000184524 CGP 9606 11:767220-790123
GeneTranscriptPositionBiotype
ENSG00000177225 (PDDC1)
Parkinson disease 7 domain containing 1 		ENST00000319863 (PDDC1-003) 767225-777484 protein_coding
ENST00000354286 (PDDC1-001) 767225-777488 nonsense_mediated_decay
ENST00000397472 (PDDC1-006) 767222-777471 protein_coding
ENST00000465313 (PDDC1-010) 767220-771427 protein_coding
ENST00000524550 (PDDC1-014) 770470-777475 protein_coding
ENST00000526325 (PDDC1-016) 767228-777487 protein_coding
ENST00000526650 (PDDC1-017) 767228-774026 protein_coding
ENST00000528309 (PDDC1-012) 767222-774068 protein_coding
ENST00000528602 (PDDC1-008) 773330-777484 retained_intron
ENST00000529362 (PDDC1-007) 775065-777179 processed_transcript
ENST00000529966 (PDDC1-018) 770812-777483 processed_transcript
ENST00000530209 (PDDC1-013) 770698-772614 retained_intron
ENST00000532320 (PDDC1-004) 770550-777485 retained_intron
ENST00000532839 (PDDC1-015) 771035-777484 processed_transcript
ENST00000533960 (PDDC1-009) 770844-771370 retained_intron
ENST00000534603 (PDDC1-005) 770812-777483 nonsense_mediated_decay
ENSG00000184524 (CEND1)
cell cycle exit and neuronal differentiation 1 		ENST00000330106 (CEND1-001) 787104-790123 protein_coding
ENST00000524587 (CEND1-002) 788178-790113 processed_transcript
ENSG00000255142 (AP006621.6)
 ENST00000533938 (AP006621.6-001) 781645-782105 lincRNA
ENSG00000255284 (AP006621.5)
 ENST00000525941 (AP006621.5-002) 777608-784297 lincRNA
ENST00000526588 (AP006621.5-003) 777578-778285 lincRNA
ENST00000530083 (AP006621.5-001) 777582-784180 lincRNA
ENSG00000279672 (NS3BP)
NS3BP 		ENST00000623692 (NS3BP-201) 780117-780755 pseudogene
ENST00000623846 (NS3BP-001) 779617-780755 TEC
CIL_0003OJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051007-ENSMUSG00000060240 CGP 10090 7:141408135-141429491
GeneTranscriptPositionBiotype
ENSMUSG00000051007 (Pddc1)
Parkinson disease 7 domain containing 1 		ENSMUST00000106008 (Pddc1-001) 141408184-141414136 protein_coding
ENSMUST00000127556 (Pddc1-003) 141408186-141414078 retained_intron
ENSMUST00000128006 (Pddc1-005) 141410844-141414065 retained_intron
ENSMUST00000140337 (Pddc1-006) 141408184-141409331 retained_intron
ENSMUST00000142852 (Pddc1-004) 141411551-141414076 retained_intron
ENSMUST00000156353 (Pddc1-002) 141408135-141414090 retained_intron
ENSMUSG00000060240 (Cend1)
cell cycle exit and neuronal differentiation 1 		ENSMUST00000084436 (Cend1-003) 141426446-141429425 protein_coding
ENSMUST00000124444 (Cend1-001) 141426446-141429491 protein_coding
ENSMUST00000137488 (Cend1-002) 141426451-141429418 protein_coding
ENSMUST00000164387 (Cend1-201) 141426451-141429351 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OJ_0001ENSG00000177225ENST00000319863ENST00000354286ENST00000397472ENST00000465313ENST00000524550ENST00000526325ENST00000526650ENST00000528309ENST00000528602ENST00000529362ENST00000529966ENST00000530209ENST00000532320ENST00000532839ENST00000533960ENST00000534603ENSG00000184524ENST00000330106ENST00000524587ENSG00000255142ENST00000533938ENSG00000255284ENST00000525941ENST00000526588ENST00000530083ENSG00000279672ENST00000623692ENST00000623846CIL_0003OJ_0002ENSMUSG00000051007ENSMUST00000106008ENSMUST00000127556ENSMUST00000128006ENSMUST00000140337ENSMUST00000142852ENSMUST00000156353ENSMUSG00000060240ENSMUST00000084436ENSMUST00000124444ENSMUST00000137488ENSMUST00000164387
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OJ_0001ENSG00000177225ENST00000319863ENST00000354286ENST00000528309ENSG00000184524ENST00000330106ENST00000524587ENSG00000255142ENST00000533938ENSG00000255284ENST00000525941ENST00000526588ENST00000530083ENSG00000279672ENST00000623692ENST00000623846CIL_0003OJ_0002ENSMUSG00000051007ENSMUST00000106008ENSMUST00000127556ENSMUST00000140337ENSMUST00000156353ENSMUSG00000060240ENSMUST00000084436ENSMUST00000124444ENSMUST00000137488ENSMUST00000164387
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177225 ENST00000319863 4.670±0.00 9.966±0.00 N/A 3.824±2.66 9.923±0.00 2.587±0.00 1.610±1.27 13.141±0.00 1.873±1.37 2.170±1.79 0.895±0.00 8.863±4.43 8.208±1.26 7.474±0.47
ENST00000354286 N/A N/A N/A N/A N/A N/A N/A 2.211±0.00 N/A N/A 0.711±0.00 0.354±0.00 N/A N/A
ENST00000397472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528309 N/A N/A N/A N/A N/A N/A N/A N/A 4.666±0.00 N/A N/A N/A N/A N/A
ENST00000528602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184524 ENST00000330106 N/A N/A 0.075±0.00 41.562±29.77 0.068±0.00 1.763±0.00 0.338±0.00 0.040±0.00 N/A N/A N/A 0.157±0.07 0.371±0.00 0.409±0.17
ENST00000524587 N/A N/A N/A N/A N/A 2.244±0.00 N/A 0.486±0.00 N/A N/A 0.345±0.00 N/A N/A N/A
ENSG00000255142 ENST00000533938 0.998±0.00 0.716±0.00 N/A N/A 0.394±0.00 0.622±0.00 N/A 1.049±0.00 N/A 0.365±0.00 N/A 0.687±0.00 N/A 0.208±0.12
ENSG00000255284 ENST00000525941 N/A N/A 2.237±0.00 1.785±0.00 2.621±0.00 N/A 0.278±0.19 0.675±0.32 0.514±0.34 1.332±0.00 1.766±1.04 0.495±0.00 0.706±0.15 1.314±0.31
ENST00000526588 N/A N/A 2.508±0.00 N/A N/A 1.870±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530083 N/A 0.929±0.00 0.505±0.00 0.674±0.33 1.260±0.00 N/A 0.256±0.00 1.419±0.05 0.442±0.06 1.471±0.95 N/A 1.597±0.83 0.732±0.15 2.077±0.39
ENSG00000279672 ENST00000623692 0.494±0.00 0.358±0.00 N/A N/A N/A 0.441±0.16 0.375±0.00 0.987±0.00 N/A 1.169±0.00 2.578±0.00 3.539±0.00 0.204±0.00 0.904±0.00
ENST00000623846 1.005±0.00 1.494±0.00 0.076±0.00 1.879±1.56 1.894±0.00 1.043±0.00 0.246±0.00 0.400±0.00 0.342±0.09 0.176±0.00 0.561±0.00 0.581±0.00 0.250±0.13 0.890±0.11
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000051007 ENSMUST00000106008 35.079±1.95 40.006±5.45 17.401±8.69 18.596±8.60 32.719±12.55 41.445±3.47 8.943±0.78 29.899±2.91 17.105±4.94 30.656±4.34 3.101±0.40 54.054±24.52 17.067±4.84 10.131±5.04
ENSMUST00000127556 N/A N/A N/A N/A 4.116±0.00 N/A N/A N/A N/A N/A 0.403±0.00 3.259±0.00 0.959±0.00 0.203±0.00
ENSMUST00000128006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140337 N/A N/A N/A N/A 12.667±0.00 N/A N/A N/A N/A N/A N/A 4.471±1.78 N/A 0.153±0.00
ENSMUST00000142852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156353 3.932±0.00 N/A 3.986±0.94 3.062±1.18 3.150±0.04 N/A 1.626±0.14 N/A 1.914±0.24 3.354±0.33 0.370±0.07 2.670±0.34 1.625±0.34 1.399±0.03
ENSMUSG00000060240 ENSMUST00000084436 0.291±0.12 0.380±0.19 N/A N/A 0.083±0.00 0.355±0.29 0.115±0.02 0.464±0.00 0.040±0.05 0.151±0.01 0.040±0.03 0.141±0.08 0.044±0.02 0.217±0.02
ENSMUST00000124444 0.405±0.00 0.402±0.16 0.766±0.32 15.303±9.56 0.195±0.03 0.597±0.26 0.460±0.12 0.259±0.12 0.052±0.03 0.115±0.08 0.216±0.02 0.141±0.00 0.243±0.14 0.154±0.11
ENSMUST00000137488 0.192±0.01 N/A 0.213±0.00 5.329±1.92 0.191±0.00 0.480±0.03 0.274±0.05 0.206±0.09 N/A 0.113±0.00 0.105±0.07 0.221±0.12 0.087±0.01 0.081±0.02
ENSMUST00000164387 N/A N/A N/A 31.657±0.00 0.109±0.04 N/A N/A N/A 0.025±0.01 N/A 0.088±0.01 0.098±0.05 0.158±0.01 0.019±0.00

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