C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Parkinson disease 7 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000051007 Pddc1 10090 - 7:141408135-141414136 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000106008 Pddc1-001 141408184-141414136 protein_coding
  ENSMUST00000127556 Pddc1-003 141408186-141414078 retained_intron
  ENSMUST00000128006 Pddc1-005 141410844-141414065 retained_intron
  ENSMUST00000140337 Pddc1-006 141408184-141409331 retained_intron
  ENSMUST00000142852 Pddc1-004 141411551-141414076 retained_intron
  ENSMUST00000156353 Pddc1-002 141408135-141414090 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106008ENSMUST00000127556ENSMUST00000140337ENSMUST00000156353
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106008 35.079±1.95 40.006±5.45 17.401±8.69 18.596±8.60 32.719±12.55 41.445±3.47 8.943±0.78 29.899±2.91 17.105±4.94 30.656±4.34 3.101±0.40 54.054±24.52 17.067±4.84 10.131±5.04
ENSMUST00000127556 N/A N/A N/A N/A 4.116±0.00 N/A N/A N/A N/A N/A 0.403±0.00 3.259±0.00 0.959±0.00 0.203±0.00
ENSMUST00000140337 N/A N/A N/A N/A 12.667±0.00 N/A N/A N/A N/A N/A N/A 4.471±1.78 N/A 0.153±0.00
ENSMUST00000156353 3.932±0.00 N/A 3.986±0.94 3.062±1.18 3.150±0.04 N/A 1.626±0.14 N/A 1.914±0.24 3.354±0.33 0.370±0.07 2.670±0.34 1.625±0.34 1.399±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OK CIL_0003OK_0002 CGP 7:141392199-141414136
CIL_0003OJ CIL_0003OJ_0002 CGP 7:141408135-141429491

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053609 pddc1 Parkinson disease 7 domain containing 1 protein_coding Danio_rerio
ENSG00000177225 PDDC1 Parkinson disease 7 domain containing 1 protein_coding Homo_sapiens

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