C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor subfamily 2, group C, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177463 NR2C2 9606 + 3:14947584-15053600 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323373 NR2C2-001 14947729-15043349 protein_coding
  ENST00000393102 NR2C2-004 14962407-15043029 protein_coding
  ENST00000406272 NR2C2-201 15003915-15043008 protein_coding
  ENST00000413118 NR2C2-006 14947584-15013718 protein_coding
  ENST00000413194 NR2C2-012 15034653-15053600 protein_coding
  ENST00000425241 NR2C2-002 14947584-15043349 protein_coding
  ENST00000435454 NR2C2-008 14947705-15004592 protein_coding
  ENST00000437120 NR2C2-009 14962409-15020935 protein_coding
  ENST00000439011 NR2C2-011 15032427-15053600 protein_coding
  ENST00000475707 NR2C2-003 14948632-15043349 retained_intron
  ENST00000478572 NR2C2-005 15025565-15043337 processed_transcript
  ENST00000495282 NR2C2-010 15034324-15038047 retained_intron
  ENST00000617312 NR2C2-202 15003915-15049273 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000617312
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000617312 5.316±0.00 5.647±0.00 6.514±0.00 4.418±0.00 4.117±0.03 2.630±0.00 3.962±1.33 1.801±0.00 5.165±0.08 5.053±0.00 4.557±1.72 6.921±1.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AG CIL_0005AG_0001 CGP 3:14818962-15053600
CIL_0005AF CIL_0005AF_0001 CGP 3:14947584-15065335

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA:IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0003713 TAS transcription coactivator activity
GO:0004872 TAS receptor activity
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007283 IEA spermatogenesis
GO:0007399 TAS nervous system development
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0021549 IEA cerebellum development
GO:0030154 IEA cell differentiation
GO:0040019 IEA positive regulation of embryonic development
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IDA:IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IDA protein heterodimerization activity
GO:0048520 IEA positive regulation of behavior
GO:0051321 IEA meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042477 nr2c2 nuclear receptor subfamily 2, group C, member 2 protein_coding Danio_rerio
ENSMUSG00000005893 Nr2c2 nuclear receptor subfamily 2, group C, member 2 protein_coding Mus_musculus

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