C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor subfamily 2, group C, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005893 Nr2c2 10090 + 6:92091390-92173057 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000113460 Nr2c2-001 92091390-92173057 protein_coding
  ENSMUST00000113463 Nr2c2-002 92092433-92167705 protein_coding
  ENSMUST00000133133 Nr2c2-005 92138015-92139832 processed_transcript
  ENSMUST00000133321 Nr2c2-004 92145727-92156610 processed_transcript
  ENSMUST00000146175 Nr2c2-003 92139796-92168668 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113460ENSMUST00000113463ENSMUST00000146175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113460 1.420±0.00 3.208±0.95 1.666±0.03 2.574±0.41 2.112±0.18 1.600±0.40 N/A 1.367±0.08 1.310±0.65 1.501±0.06 1.180±0.22 2.298±0.47 0.923±0.23 0.930±0.00
ENSMUST00000113463 4.368±0.92 3.968±0.74 N/A 11.207±0.00 3.368±0.00 N/A N/A 4.082±0.11 1.703±0.00 3.476±0.00 N/A 5.506±1.16 N/A 5.443±1.22
ENSMUST00000146175 8.701±2.43 5.651±2.88 3.364±0.12 7.373±1.82 9.252±2.12 7.226±1.23 4.857±0.32 7.069±0.61 2.700±0.69 9.761±0.58 3.047±0.20 9.628±2.33 3.078±0.94 6.197±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AG CIL_0005AG_0002 CGP 6:91978878-92173057
CIL_0005AF CIL_0005AF_0002 CGP 6:92091390-92184033

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007283 IMP spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0021549 IMP cerebellum development
GO:0030154 IEA cell differentiation
GO:0040019 IMP positive regulation of embryonic development
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0048520 IMP positive regulation of behavior
GO:0051321 IMP meiotic cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042477 nr2c2 nuclear receptor subfamily 2, group C, member 2 protein_coding Danio_rerio
ENSG00000177463 NR2C2 nuclear receptor subfamily 2, group C, member 2 protein_coding Homo_sapiens

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