C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005AG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154783-ENSG00000177463 CGP 9606 3:14818962-15053600
GeneTranscriptPositionBiotype
ENSG00000131368 (MRPS25)
mitochondrial ribosomal protein S25 		ENST00000253686 (MRPS25-001) 15048518-15065335 protein_coding
ENST00000420267 (MRPS25-004) 15049881-15065311 nonsense_mediated_decay
ENST00000444840 (MRPS25-002) 15051717-15065317 protein_coding
ENST00000447299 (MRPS25-005) 15052435-15065300 nonsense_mediated_decay
ENST00000449354 (MRPS25-003) 15049212-15065260 protein_coding
ENST00000474866 (MRPS25-007) 15045099-15050102 processed_transcript
ENST00000496484 (MRPS25-006) 15042460-15049967 processed_transcript
ENSG00000154783 (FGD5)
FYVE, RhoGEF and PH domain containing 5 		ENST00000285046 (FGD5-001) 14818962-14934388 protein_coding
ENST00000457774 (FGD5-005) 14821432-14900453 protein_coding
ENST00000468662 (FGD5-002) 14882305-14933438 processed_transcript
ENST00000476851 (FGD5-003) 14896962-14933439 processed_transcript
ENST00000487605 (FGD5-004) 14930763-14933438 retained_intron
ENST00000543601 (FGD5-201) 14818962-14934565 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0005AG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034037-ENSMUSG00000005893 CGP 10090 6:91978878-92173057
GeneTranscriptPositionBiotype
ENSMUSG00000005893 (Nr2c2)
nuclear receptor subfamily 2, group C, member 2 		ENSMUST00000113460 (Nr2c2-001) 92091390-92173057 protein_coding
ENSMUST00000113463 (Nr2c2-002) 92092433-92167705 protein_coding
ENSMUST00000133133 (Nr2c2-005) 92138015-92139832 processed_transcript
ENSMUST00000133321 (Nr2c2-004) 92145727-92156610 processed_transcript
ENSMUST00000146175 (Nr2c2-003) 92139796-92168668 nonsense_mediated_decay
ENSMUSG00000014551 (Mrps25)
mitochondrial ribosomal protein S25 		ENSMUST00000014695 (Mrps25-003) 92174838-92175902 processed_transcript
ENSMUST00000134132 (Mrps25-002) 92178313-92183971 retained_intron
ENSMUST00000140438 (Mrps25-001) 92169525-92184033 protein_coding
ENSMUSG00000034037 (Fgd5)
FYVE, RhoGEF and PH domain containing 5 		ENSMUST00000089334 (Fgd5-001) 91978878-92076004 protein_coding
ENSMUST00000113466 (Fgd5-201) 91987110-92076004 protein_coding
ENSMUST00000130369 (Fgd5-003) 92071188-92074215 processed_transcript
ENSMUST00000146743 (Fgd5-002) 92067429-92076004 processed_transcript
ENSMUSG00000087317 (4930466I24Rik)
RIKEN cDNA 4930466I24 gene 		ENSMUST00000144105 (4930466I24Rik-001) 92012394-92016117 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AG_0001ENSG00000131368ENST00000253686ENST00000420267ENST00000444840ENST00000447299ENST00000449354ENST00000474866ENST00000496484ENSG00000154783ENST00000285046ENST00000457774ENST00000468662ENST00000476851ENST00000487605ENST00000543601CIL_0005AG_0002ENSMUSG00000005893ENSMUST00000113460ENSMUST00000113463ENSMUST00000133133ENSMUST00000133321ENSMUST00000146175ENSMUSG00000014551ENSMUST00000014695ENSMUST00000134132ENSMUST00000140438ENSMUSG00000034037ENSMUST00000089334ENSMUST00000113466ENSMUST00000130369ENSMUST00000146743ENSMUSG00000087317ENSMUST00000144105
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AG_0001ENSG00000131368ENST00000253686ENSG00000154783ENST00000285046CIL_0005AG_0002ENSMUSG00000005893ENSMUST00000113460ENSMUST00000113463ENSMUST00000146175ENSMUSG00000014551ENSMUST00000014695ENSMUST00000134132ENSMUST00000140438ENSMUSG00000034037ENSMUST00000089334ENSMUST00000113466ENSMUST00000146743ENSMUSG00000087317ENSMUST00000144105
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131368 ENST00000253686 N/A 7.883±0.00 N/A 7.786±0.00 N/A 5.503±1.59 5.602±3.27 6.834±4.43 3.389±0.00 N/A 2.406±0.00 9.479±2.50 5.656±0.00 12.039±3.15
ENST00000420267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154783 ENST00000285046 15.815±0.00 8.790±0.00 3.536±0.00 N/A N/A N/A 1.662±0.00 N/A 3.714±0.00 8.870±4.56 N/A N/A 13.179±1.89 N/A
ENST00000457774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005893 ENSMUST00000113460 1.420±0.00 3.208±0.95 1.666±0.03 2.574±0.41 2.112±0.18 1.600±0.40 N/A 1.367±0.08 1.310±0.65 1.501±0.06 1.180±0.22 2.298±0.47 0.923±0.23 0.930±0.00
ENSMUST00000113463 4.368±0.92 3.968±0.74 N/A 11.207±0.00 3.368±0.00 N/A N/A 4.082±0.11 1.703±0.00 3.476±0.00 N/A 5.506±1.16 N/A 5.443±1.22
ENSMUST00000133133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146175 8.701±2.43 5.651±2.88 3.364±0.12 7.373±1.82 9.252±2.12 7.226±1.23 4.857±0.32 7.069±0.61 2.700±0.69 9.761±0.58 3.047±0.20 9.628±2.33 3.078±0.94 6.197±0.82
ENSMUSG00000014551 ENSMUST00000014695 N/A N/A N/A 38.856±0.00 N/A N/A N/A N/A N/A N/A N/A 55.983±0.00 39.988±20.51 40.604±0.00
ENSMUST00000134132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.308±0.00 N/A
ENSMUST00000140438 6.872±1.03 3.258±0.38 8.669±0.64 11.353±5.14 5.890±1.16 4.744±0.50 5.572±0.39 6.407±0.54 5.059±2.60 6.607±0.47 4.716±0.27 5.209±1.49 3.699±1.66 5.821±2.38
ENSMUSG00000034037 ENSMUST00000089334 4.142±1.36 3.095±0.48 1.702±0.49 1.881±1.36 2.397±1.11 1.485±0.35 3.073±0.30 3.060±0.49 0.577±0.25 10.786±1.20 1.444±0.49 3.017±0.76 1.161±1.09 0.283±0.05
ENSMUST00000113466 N/A N/A N/A 0.351±0.00 0.440±0.00 N/A N/A N/A 0.227±0.00 N/A 0.955±0.32 2.980±1.41 0.222±0.00 0.106±0.00
ENSMUST00000130369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146743 4.086±2.16 N/A 2.491±0.06 1.781±0.55 1.254±0.00 1.126±0.09 1.646±0.37 1.906±0.20 0.525±0.24 N/A 1.099±0.43 2.370±0.47 1.150±0.42 0.170±0.00
ENSMUSG00000087317 ENSMUST00000144105 0.030±0.00 0.045±0.01 0.003±0.00 0.021±0.01 0.026±0.01 0.027±0.00 0.047±0.02 0.048±0.04 0.021±0.01 0.156±0.03 0.026±0.01 0.051±0.02 0.014±0.01 0.134±0.07

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