C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nescient helix loop helix 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177551 NHLH2 9606 - 1:115836377-115843917 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320238 NHLH2-002 115836377-115841126 protein_coding
  ENST00000369506 NHLH2-001 115836692-115843917 protein_coding
  ENST00000429731 NHLH2-003 115838052-115840741 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungOvaryPlacentaTestisENST00000320238ENST00000369506ENST00000429731
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000320238 N/A 0.023±0.00 0.274±0.11 N/A N/A 0.071±0.00 0.012±0.00 0.191±0.14 0.017±0.00 0.405±0.13
ENST00000369506 0.004±0.00 N/A 0.288±0.23 0.005±0.00 0.003±0.00 0.002±0.00 0.011±0.00 0.033±0.00 0.007±0.00 0.024±0.00
ENST00000429731 N/A N/A N/A N/A 0.247±0.00 N/A N/A 0.209±0.00 0.052±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HI CIL_0008HI_0001 VISTA 1:115492363-116093752

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001102 IPI RNA polymerase II activating transcription factor binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0007417 TAS central nervous system development
GO:0007617 IEA mating behavior
GO:0030154 IEA cell differentiation
GO:0042698 IEA ovulation cycle
GO:0045944 TAS positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0051091 TAS positive regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025495 nhlh2 nescient helix loop helix 2 protein_coding Danio_rerio
ENSMUSG00000048540 Nhlh2 nescient helix loop helix 2 protein_coding Mus_musculus

Loading