C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transducin (beta)-like 1 X-linked receptor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177565 TBL1XR1 9606 - 3:177019355-177197473 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352800 TBL1XR1-003 177051504-177197252 protein_coding
  ENST00000413084 TBL1XR1-013 177053878-177197226 protein_coding
  ENST00000422066 TBL1XR1-011 177051671-177197225 protein_coding
  ENST00000422442 TBL1XR1-005 177053773-177197473 protein_coding
  ENST00000424913 TBL1XR1-009 177050558-177196433 protein_coding
  ENST00000427349 TBL1XR1-006 177053792-177197251 protein_coding
  ENST00000428970 TBL1XR1-007 177050550-177196484 protein_coding
  ENST00000430069 TBL1XR1-001 177019355-177196478 protein_coding
  ENST00000431421 TBL1XR1-014 177051504-177197225 protein_coding
  ENST00000431674 TBL1XR1-012 177051642-177197192 protein_coding
  ENST00000437738 TBL1XR1-010 177051504-177196423 protein_coding
  ENST00000443315 TBL1XR1-008 177051687-177196435 protein_coding
  ENST00000450267 TBL1XR1-017 177051571-177197183 protein_coding
  ENST00000457928 TBL1XR1-002 177023320-177197468 protein_coding
  ENST00000474363 TBL1XR1-004 177020754-177027830 retained_intron
  ENST00000491623 TBL1XR1-016 177079454-177098541 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000430069ENST00000457928ENST00000474363
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000430069 1.907±0.00 4.432±0.00 2.831±0.00 3.181±2.04 3.667±0.13 2.428±0.00 N/A 1.096±0.00 N/A 1.505±0.00 1.575±0.00 7.252±3.80 1.560±0.00 2.095±0.00
ENST00000457928 N/A N/A N/A 4.136±0.00 11.897±0.00 4.917±0.00 2.976±0.00 2.912±0.00 7.448±0.00 5.989±0.00 1.548±0.00 8.609±0.00 N/A 1.724±0.00
ENST00000474363 N/A 4.856±0.00 2.544±0.00 2.419±0.00 6.429±0.52 3.765±0.10 1.505±0.00 N/A 1.475±0.00 3.058±0.00 0.608±0.00 5.315±2.13 1.860±0.91 3.021±0.79

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005876 IDA spindle microtubule
GO:0006351 IEA transcription, DNA-templated
GO:0007219 TAS Notch signaling pathway
GO:0008013 IPI beta-catenin binding
GO:0016568 IEA chromatin modification
GO:0017053 IDA transcriptional repressor complex
GO:0042393 IDA histone binding
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044212 ISS transcription regulatory region DNA binding
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0047485 IPI protein N-terminus binding
GO:0060070 IMP canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058696 tbl1xr1a transducin (beta)-like 1 X-linked receptor 1a protein_coding Danio_rerio
ENSMUSG00000027630 Tbl1xr1 transducin (beta)-like 1X-linked receptor 1 protein_coding Mus_musculus

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