C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin (beta)-like 1 X-linked receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430069 TBL1XR1-001 ENSG00000177565 9606 - 3:177019355-177196478 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000430069
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000430069 1.907±0.00 4.432±0.00 2.831±0.00 3.181±2.04 3.667±0.13 2.428±0.00 1.096±0.00 1.505±0.00 1.575±0.00 7.252±3.80 1.560±0.00 2.095±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005876 IDA spindle microtubule
GO:0006351 IEA transcription, DNA-templated
GO:0007219 TAS Notch signaling pathway
GO:0008013 IPI beta-catenin binding
GO:0016568 IEA chromatin modification
GO:0017053 IDA transcriptional repressor complex
GO:0042393 IDA histone binding
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044212 ISS transcription regulatory region DNA binding
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0047485 IPI protein N-terminus binding
GO:0060070 IMP canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063988 Tbl1xr1-201 protein_coding Mus_musculus 0 3072
ENSDART00000141612 tbl1xr1a-002 protein_coding Danio_rerio 0 1236
ENSDART00000081607 tbl1xr1a-201 protein_coding Danio_rerio 0 1059
ENSDART00000146360 tbl1xr1b-001 protein_coding Danio_rerio 0 1042
ENSDART00000022663 tbl1xr1b-201 protein_coding Danio_rerio 0 200

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