C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transducin (beta)-like 1 X-linked receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457928 TBL1XR1-002 ENSG00000177565 9606 - 3:177023320-177197468 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000457928
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000457928 4.136±0.00 11.897±0.00 4.917±0.00 2.976±0.00 2.912±0.00 7.448±0.00 5.989±0.00 1.548±0.00 8.609±0.00 1.724±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005876 IDA spindle microtubule
GO:0006351 IEA transcription, DNA-templated
GO:0007219 TAS Notch signaling pathway
GO:0008013 IPI beta-catenin binding
GO:0016568 IEA chromatin modification
GO:0017053 IDA transcriptional repressor complex
GO:0042393 IDA histone binding
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044212 ISS transcription regulatory region DNA binding
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0047485 IPI protein N-terminus binding
GO:0060070 IMP canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063988 Tbl1xr1-201 protein_coding Mus_musculus 0 3072
ENSDART00000141612 tbl1xr1a-002 protein_coding Danio_rerio 0 1236
ENSDART00000081607 tbl1xr1a-201 protein_coding Danio_rerio 0 1059
ENSDART00000146360 tbl1xr1b-001 protein_coding Danio_rerio 0 1042
ENSDART00000022663 tbl1xr1b-201 protein_coding Danio_rerio 0 200

Loading