C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CD151 molecule (Raph blood group)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177697 CD151 9606 + 11:832843-839831 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322008 CD151-201 832952-838834 protein_coding
  ENST00000397420 CD151-001 832843-838829 protein_coding
  ENST00000397421 CD151-202 832952-838834 protein_coding
  ENST00000524748 CD151-012 832994-837544 protein_coding
  ENST00000525181 CD151-020 838180-839831 processed_transcript
  ENST00000525333 CD151-008 832986-836405 protein_coding
  ENST00000525718 CD151-015 832887-836442 protein_coding
  ENST00000525868 CD151-007 832986-836525 retained_intron
  ENST00000526439 CD151-006 835551-836360 protein_coding
  ENST00000526661 CD151-005 832997-837023 retained_intron
  ENST00000526693 CD151-009 832969-837531 protein_coding
  ENST00000527341 CD151-013 832994-837544 protein_coding
  ENST00000528011 CD151-014 836063-838798 protein_coding
  ENST00000528867 CD151-010 834872-836436 protein_coding
  ENST00000529810 CD151-019 832961-837613 protein_coding
  ENST00000530155 CD151-016 832952-836480 retained_intron
  ENST00000530320 CD151-011 835194-837513 protein_coding
  ENST00000530726 CD151-002 833009-838831 nonsense_mediated_decay
  ENST00000531999 CD151-017 832986-836539 retained_intron
  ENST00000532045 CD151-004 834527-838835 retained_intron
  ENST00000532075 CD151-018 836803-838016 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000322008ENST00000397421ENST00000528011ENST00000530320ENST00000530726ENST00000532045
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000322008 N/A N/A N/A 2.198±0.00 8.953±0.00 36.429±28.82 27.113±22.36 24.022±20.58 15.895±8.99 28.678±22.98 81.196±67.09 62.438±13.67 36.887±0.00
ENST00000397421 216.363±0.00 182.275±0.00 2.697±0.00 13.105±0.00 314.081±0.00 133.550±0.00 48.988±0.00 81.920±0.00 31.567±0.00 92.158±0.00 88.747±0.00 57.741±6.27 64.210±42.60
ENST00000528011 N/A N/A N/A N/A N/A N/A N/A N/A N/A 50.506±0.00 N/A N/A N/A
ENST00000530320 N/A N/A N/A N/A N/A N/A N/A 5.394±0.00 11.022±0.00 N/A 378.464±0.00 191.577±0.00 42.971±0.00
ENST00000530726 N/A N/A N/A N/A N/A N/A N/A 4.279±0.00 N/A 26.579±21.46 298.151±0.00 149.205±14.79 N/A
ENST00000532045 N/A N/A N/A N/A 3.967±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ES CIL_0003ES_0001 CGP 11:826144-839831
CIL_0003ET CIL_0003ET_0001 CGP 11:832843-842545

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005178 IPI integrin binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005925 IDA focal adhesion
GO:0007155 NAS cell adhesion
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0016477 IEA cell migration
GO:0030198 TAS extracellular matrix organization
GO:0031581 TAS hemidesmosome assembly
GO:0034329 TAS cell junction assembly
GO:0042098 IEA T cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068629 cd151l CD151 antigen, like protein_coding Danio_rerio
ENSMUSG00000025510 Cd151 CD151 antigen protein_coding Mus_musculus

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