C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CD151 molecule (Raph blood group)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397421 CD151-202 ENSG00000177697 9606 + 11:832952-838834 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000397421
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000397421 216.363±0.00 182.275±0.00 2.697±0.00 13.105±0.00 314.081±0.00 133.550±0.00 48.988±0.00 81.920±0.00 31.567±0.00 92.158±0.00 88.747±0.00 57.741±6.27 64.210±42.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ES CIL_0003ES_0001 CGP 11:826144-839831
CIL_0003ET CIL_0003ET_0001 CGP 11:832843-842545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005178 IPI integrin binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005925 IDA focal adhesion
GO:0007155 NAS cell adhesion
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0030198 TAS extracellular matrix organization
GO:0031581 TAS hemidesmosome assembly
GO:0034329 TAS cell junction assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058746 Cd151-201 protein_coding Mus_musculus 0 880
ENSMUST00000177840 Cd151-203 protein_coding Mus_musculus 0 880
ENSMUST00000106000 Cd151-202 protein_coding Mus_musculus 0 880

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