C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 20, member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177706 FAM20C 9606 + 7:192969-260745 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313766 FAM20C-001 192969-260745 protein_coding
  ENST00000471328 FAM20C-002 195625-197575 processed_transcript
  ENST00000477004 FAM20C-003 195242-208976 processed_transcript
  ENST00000512382 FAM20C-005 256195-257453 retained_intron
  ENST00000515795 FAM20C-004 245895-260745 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313766ENST00000471328ENST00000515795
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313766 15.924±0.00 15.865±0.00 5.696±0.00 8.882±6.77 11.880±8.50 12.227±11.22 5.275±4.51 26.914±22.07 16.579±14.52 15.286±15.11 7.401±4.66 17.286±16.22 11.073±2.24 10.683±7.32
ENST00000471328 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.186±0.00 1.858±0.00 N/A N/A N/A
ENST00000515795 N/A N/A N/A N/A N/A 0.979±0.00 0.155±0.00 N/A N/A 1.375±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001501 IEA skeletal system development
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005509 IEA calcium ion binding
GO:0005615 IDA extracellular space
GO:0005794 IDA Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0030501 IEA positive regulation of bone mineralization
GO:0036179 IEA osteoclast maturation
GO:0040036 IEA regulation of fibroblast growth factor receptor signaling pathway
GO:0045669 IEA positive regulation of osteoblast differentiation
GO:0051174 IEA regulation of phosphorus metabolic process
GO:0070062 IDA extracellular vesicular exosome
GO:0070166 IEA enamel mineralization
GO:0071895 IEA odontoblast differentiation
GO:0097187 IEA dentinogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074317 FAM20C (1 of 2) family with sequence similarity 20, member C protein_coding Danio_rerio
ENSDARG00000090338 fam20cb family with sequence similarity 20, member Cb protein_coding Danio_rerio
ENSMUSG00000025854 Fam20c family with sequence similarity 20, member C protein_coding Mus_musculus

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