C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 20, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000313766 FAM20C-001 ENSG00000177706 9606 + 7:192969-260745 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313766
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313766 15.924±0.00 15.865±0.00 5.696±0.00 8.882±6.77 11.880±8.50 12.227±11.22 5.275±4.51 26.914±22.07 16.579±14.52 15.286±15.11 7.401±4.66 17.286±16.22 11.073±2.24 10.683±7.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IEA skeletal system development
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005509 IEA calcium ion binding
GO:0005615 IDA extracellular space
GO:0005794 IDA Golgi apparatus
GO:0006468 IEA protein phosphorylation
GO:0030501 IEA positive regulation of bone mineralization
GO:0036179 IEA osteoclast maturation
GO:0040036 IEA regulation of fibroblast growth factor receptor signaling pathway
GO:0045669 IEA positive regulation of osteoblast differentiation
GO:0051174 IEA regulation of phosphorus metabolic process
GO:0070062 IDA extracellular vesicular exosome
GO:0070166 IEA enamel mineralization
GO:0071895 IEA odontoblast differentiation
GO:0097187 IEA dentinogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026972 Fam20c-001 protein_coding Mus_musculus 0 1624
ENSMUST00000160645 Fam20c-002 nonsense_mediated_decay Mus_musculus 0 1288
ENSMUST00000159176 Fam20c-003 processed_transcript Mus_musculus 0 791
ENSDART00000113524 FAM20C (1 of 2)-201 protein_coding Danio_rerio 0 723
ENSMUST00000160988 Fam20c-004 processed_transcript Mus_musculus 0 595

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