C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 518A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177853 ZNF518A 9606 + 10:96129715-96205288 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316045 ZNF518A-006 96129715-96162742 protein_coding
  ENST00000442635 ZNF518A-008 96156013-96204129 processed_transcript
  ENST00000478086 ZNF518A-002 96130056-96157337 protein_coding
  ENST00000484770 ZNF518A-004 96130679-96132909 retained_intron
  ENST00000488700 ZNF518A-003 96129735-96156019 processed_transcript
  ENST00000534948 ZNF518A-001 96155343-96163761 retained_intron
  ENST00000539666 ZNF518A-005 96130056-96151566 processed_transcript
  ENST00000563195 ZNF518A-007 96130072-96205288 processed_transcript
  ENST00000614149 ZNF518A-201 96151409-96163752 protein_coding
  ENST00000624776 ZNF518A-202 96130056-96163752 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000316045ENST00000534948ENST00000614149ENST00000624776
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000316045 0.715±0.00 1.037±0.00 1.008±0.00 0.943±0.13 1.437±0.02 1.377±0.82 0.801±0.28 1.861±0.43 1.148±0.62 1.759±1.13 0.279±0.01 2.244±0.55 0.801±0.55 6.173±0.75
ENST00000534948 0.340±0.00 0.747±0.00 1.015±0.00 0.377±0.00 1.097±0.79 2.347±0.00 N/A 0.752±0.08 1.423±0.00 2.018±0.00 0.201±0.00 2.018±1.44 N/A 1.316±0.00
ENST00000614149 N/A N/A 0.465±0.00 N/A N/A N/A 0.356±0.00 N/A N/A 0.266±0.00 N/A 1.599±0.61 N/A 0.795±0.00
ENST00000624776 N/A N/A N/A N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071R CIL_00071R_0002 CGP 10:96043394-96205288
CIL_0001C3 CIL_0001C3_0002 CGP 10:96129715-96271587

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074270 ZNF518A (1 of 2) zinc finger protein 518A protein_coding Danio_rerio
ENSDARG00000090188 ZNF518A (2 of 2) zinc finger protein 518A protein_coding Danio_rerio
ENSMUSG00000049164 Zfp518a zinc finger protein 518A protein_coding Mus_musculus

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