C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001C3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090188-ENSDARG00000042722 CGP 7955 13:51475155-51543077
GeneTranscriptPositionBiotype
ENSDARG00000042722 (blnk)
B-cell linker 		ENSDART00000062684 (blnk-001) 51494234-51540757 protein_coding
ENSDART00000132281 (blnk-002) 51526271-51543077 protein_coding
ENSDARG00000090188 (ZNF518A (2 of 2))
zinc finger protein 518A 		ENSDART00000125420 (ZNF518A (2 of 2)-201) 51475155-51487917 protein_coding
ENSDARG00000094656 (si:ch73-198l11.2)
si:ch73-198l11.2 		ENSDART00000139985 (si:ch73-198l11.2-001) 51496087-51497019 processed_transcript
CIL_0001C3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177853-ENSG00000095585 CGP 9606 10:96129715-96271587
GeneTranscriptPositionBiotype
ENSG00000095585 (BLNK)
B-cell linker 		ENST00000224337 (BLNK-001) 96191702-96271540 protein_coding
ENST00000371176 (BLNK-002) 96191702-96271540 protein_coding
ENST00000413476 (BLNK-201) 96191707-96271516 protein_coding
ENST00000427367 (BLNK-202) 96191707-96271516 protein_coding
ENST00000467799 (BLNK-004) 96204532-96271587 nonsense_mediated_decay
ENST00000468252 (BLNK-007) 96204597-96210303 retained_intron
ENST00000472763 (BLNK-005) 96215849-96227497 retained_intron
ENST00000485193 (BLNK-006) 96199966-96204854 retained_intron
ENST00000495266 (BLNK-003) 96238888-96271398 protein_coding
ENSG00000177853 (ZNF518A)
zinc finger protein 518A 		ENST00000316045 (ZNF518A-006) 96129715-96162742 protein_coding
ENST00000442635 (ZNF518A-008) 96156013-96204129 processed_transcript
ENST00000478086 (ZNF518A-002) 96130056-96157337 protein_coding
ENST00000484770 (ZNF518A-004) 96130679-96132909 retained_intron
ENST00000488700 (ZNF518A-003) 96129735-96156019 processed_transcript
ENST00000534948 (ZNF518A-001) 96155343-96163761 retained_intron
ENST00000539666 (ZNF518A-005) 96130056-96151566 processed_transcript
ENST00000563195 (ZNF518A-007) 96130072-96205288 processed_transcript
ENST00000614149 (ZNF518A-201) 96151409-96163752 protein_coding
ENST00000624776 (ZNF518A-202) 96130056-96163752 protein_coding
ENSG00000229417 (NPM1P25)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 25 		ENST00000429734 (NPM1P25-001) 96189366-96190219 processed_pseudogene
CIL_0001C3_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049164-ENSMUSG00000061132 CGP 10090 19:40894705-40994535
GeneTranscriptPositionBiotype
ENSMUSG00000049164 (Zfp518a)
zinc finger protein 518A 		ENSMUST00000050092 (Zfp518a-201) 40894705-40917947 protein_coding
ENSMUSG00000061132 (Blnk)
B cell linker 		ENSMUST00000054769 (Blnk-001) 40928927-40994535 protein_coding
ENSMUST00000117695 (Blnk-002) 40928927-40994148 protein_coding
ENSMUST00000134568 (Blnk-003) 40964605-40994535 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001C3_0001ENSDARG00000042722ENSDART00000062684ENSDART00000132281ENSDARG00000090188ENSDART00000125420ENSDARG00000094656ENSDART00000139985CIL_0001C3_0002ENSG00000095585ENST00000224337ENST00000371176ENST00000413476ENST00000427367ENST00000467799ENST00000468252ENST00000472763ENST00000485193ENST00000495266ENSG00000177853ENST00000316045ENST00000442635ENST00000478086ENST00000484770ENST00000488700ENST00000534948ENST00000539666ENST00000563195ENST00000614149ENST00000624776ENSG00000229417ENST00000429734CIL_0001C3_0003ENSMUSG00000049164ENSMUST00000050092ENSMUSG00000061132ENSMUST00000054769ENSMUST00000117695ENSMUST00000134568
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001C3_0001ENSDARG00000042722ENSDART00000062684ENSDARG00000090188ENSDART00000125420ENSDARG00000094656ENSDART00000139985CIL_0001C3_0002ENSG00000095585ENST00000224337ENST00000371176ENSG00000177853ENST00000316045ENST00000534948ENST00000614149ENST00000624776ENSG00000229417ENST00000429734CIL_0001C3_0003ENSMUSG00000049164ENSMUST00000050092ENSMUSG00000061132ENSMUST00000054769ENSMUST00000117695ENSMUST00000134568
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042722 ENSDART00000062684 N/A N/A N/A 0.298±0.22 N/A N/A 1.451±0.07 2.821±0.00 0.233±0.00 N/A 0.681±0.00 N/A N/A N/A
ENSDART00000132281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000090188 ENSDART00000125420 N/A N/A N/A 0.259±0.10 N/A N/A 0.252±0.11 0.504±0.00 0.018±0.00 N/A 0.026±0.00 N/A N/A N/A
ENSDARG00000094656 ENSDART00000139985 N/A N/A N/A N/A N/A N/A N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095585 ENST00000224337 N/A 8.488±0.00 2.528±0.00 N/A N/A N/A N/A 3.883±1.74 9.132±0.00 N/A N/A 3.397±0.00 2.312±0.17 N/A
ENST00000371176 N/A N/A N/A N/A N/A 1.219±0.00 N/A 6.211±0.00 N/A N/A N/A N/A 1.131±0.17 N/A
ENST00000413476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177853 ENST00000316045 0.715±0.00 1.037±0.00 1.008±0.00 0.943±0.13 1.437±0.02 1.377±0.82 0.801±0.28 1.861±0.43 1.148±0.62 1.759±1.13 0.279±0.01 2.244±0.55 0.801±0.55 6.173±0.75
ENST00000442635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534948 0.340±0.00 0.747±0.00 1.015±0.00 0.377±0.00 1.097±0.79 2.347±0.00 N/A 0.752±0.08 1.423±0.00 2.018±0.00 0.201±0.00 2.018±1.44 N/A 1.316±0.00
ENST00000539666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614149 N/A N/A 0.465±0.00 N/A N/A N/A 0.356±0.00 N/A N/A 0.266±0.00 N/A 1.599±0.61 N/A 0.795±0.00
ENST00000624776 N/A N/A N/A N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A N/A
ENSG00000229417 ENST00000429734 0.050±0.00 1.258±0.00 1.006±0.00 0.115±0.06 0.365±0.24 0.920±0.56 0.073±0.05 0.401±0.00 0.399±0.04 0.137±0.12 0.104±0.00 0.349±0.33 0.462±0.32 0.168±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049164 ENSMUST00000050092 1.017±0.36 0.748±0.30 0.854±0.13 0.916±0.53 0.963±0.24 0.854±0.31 0.580±0.16 0.670±0.20 0.612±0.47 1.170±0.14 0.516±0.09 1.218±0.89 3.417±0.97 0.957±0.48
ENSMUSG00000061132 ENSMUST00000054769 2.041±0.86 0.120±0.00 1.679±0.42 0.041±0.02 3.775±1.93 15.728±1.52 0.456±0.30 2.784±0.36 0.349±0.28 1.297±0.28 0.499±0.40 1.991±0.50 0.753±0.98 0.306±0.09
ENSMUST00000117695 1.652±1.01 0.686±0.24 2.175±0.02 0.816±1.00 5.595±2.46 12.355±2.47 0.602±0.42 5.051±0.49 0.385±0.21 1.887±0.25 0.633±0.38 2.688±0.88 1.784±2.91 0.554±0.25
ENSMUST00000134568 N/A N/A N/A N/A 0.300±0.00 N/A 0.034±0.00 N/A 0.021±0.00 N/A N/A N/A N/A 0.008±0.00

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