C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177868 CCDC23 9606 - 1:42807052-42817252 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372521 CCDC23-001 42807056-42817252 protein_coding
  ENST00000372522 CCDC23-002 42807052-42816804 protein_coding
  ENST00000497437 CCDC23-003 42813410-42817252 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372521ENST00000372522ENST00000497437
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372521 7.298±0.00 10.631±0.00 1.731±0.00 7.881±1.23 8.755±5.45 6.021±3.83 3.552±2.73 7.735±0.00 4.869±1.35 5.036±2.40 3.624±1.99 10.519±5.38 14.094±1.13 32.817±7.96
ENST00000372522 N/A N/A N/A N/A N/A N/A N/A N/A 2.984±0.00 N/A N/A N/A N/A 7.485±0.00
ENST00000497437 N/A N/A N/A N/A N/A N/A 0.475±0.00 N/A N/A N/A N/A 1.033±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0001 VISTA 1:42456139-43057783
CIL_0008N2 CIL_0008N2_0001 VISTA 1:42758169-43359178

Gene Ontology
GO IDEvidence TypeGO Description
GO:0009306 IDA protein secretion
GO:0010596 IGI negative regulation of endothelial cell migration
GO:0031397 IDA negative regulation of protein ubiquitination
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086898 CCDC23 Coiled-coil domain-containing protein 23 (ccdc23), mRNA protein_coding Danio_rerio
ENSMUSG00000028643 Ccdc23 coiled-coil domain containing 23 protein_coding Mus_musculus

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