C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372521 CCDC23-001 ENSG00000177868 9606 - 1:42807056-42817252 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372521
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372521 7.298±0.00 10.631±0.00 1.731±0.00 7.881±1.23 8.755±5.45 6.021±3.83 3.552±2.73 7.735±0.00 4.869±1.35 5.036±2.40 3.624±1.99 10.519±5.38 14.094±1.13 32.817±7.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0001 VISTA 1:42456139-43057783
CIL_0008N2 CIL_0008N2_0001 VISTA 1:42758169-43359178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009306 IDA protein secretion
GO:0010596 IGI negative regulation of endothelial cell migration
GO:0031397 IDA negative regulation of protein ubiquitination
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097908 Ccdc23-003 protein_coding Mus_musculus 0 274
ENSMUST00000030395 Ccdc23-001 protein_coding Mus_musculus 0 272
ENSDART00000125786 CCDC23-201 protein_coding Danio_rerio 7e-33 145
ENSMUST00000106345 Ccdc23-002 protein_coding Mus_musculus 7e-28 128

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