C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177954 RPS27 9606 + 1:153990759-153992150 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368567 RPS27-001 153990759-153992150 protein_coding
  ENST00000392558 RPS27-002 153990762-153991698 protein_coding
  ENST00000477151 RPS27-004 153990763-153992150 processed_transcript
  ENST00000493224 RPS27-003 153990763-153992145 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368567ENST00000493224
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368567 1822.000±0.00 3257.830±0.00 110.172±0.00 309.164±32.98 912.702±399.70 1158.172±733.19 256.684±78.69 498.760±53.92 575.409±16.23 1142.841±769.68 661.818±250.03 3959.524±3676.75 1362.317±895.72 629.131±554.84
ENST00000493224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.287±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000278 TAS mitotic cell cycle
GO:0003677 NAS DNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005840 IEA:NAS ribosome
GO:0006412 IEA:IC translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0008270 NAS zinc ion binding
GO:0008283 NAS cell proliferation
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000050621 Rps27rt ribosomal protein S27, retrogene protein_coding Mus_musculus

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