C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S27, retrogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050621 Rps27rt 10090 - 9:114982371-114982740 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053150 Rps27rt-001 114982371-114982740 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053150
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053150 659.785±223.02 37.447±8.54 812.165±672.10 368.148±253.26 650.477±272.87 284.220±46.41 233.751±16.52 318.913±24.60 435.190±366.20 330.827±14.65 347.913±45.07 528.966±145.82 366.100±262.74 285.726±134.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QW CIL_0002QW_0002 CGP 9:114899341-115232225

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0022627 IEA cytosolic small ribosomal subunit
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000177954 RPS27 ribosomal protein S27 protein_coding Homo_sapiens

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