C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 518B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178163 ZNF518B 9606 - 4:10439874-10457410 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326756 ZNF518B-001 10439874-10457360 protein_coding
  ENST00000500268 ZNF518B-006 10450887-10457176 retained_intron
  ENST00000503068 ZNF518B-005 10450887-10457410 retained_intron
  ENST00000507515 ZNF518B-002 10446102-10457405 protein_coding
  ENST00000515072 ZNF518B-004 10450887-10457408 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326756ENST00000500268ENST00000503068
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326756 1.239±0.00 0.658±0.00 2.162±0.00 N/A 0.759±0.00 1.522±0.74 N/A 0.635±0.40 1.873±1.22 N/A 1.533±0.88 0.441±0.17 3.326±0.00
ENST00000500268 N/A N/A N/A N/A N/A N/A 0.589±0.16 N/A N/A 0.618±0.00 1.032±0.31 N/A 1.686±0.10
ENST00000503068 1.218±0.00 0.761±0.00 1.033±0.00 1.257±0.36 0.941±0.30 1.193±0.00 N/A 1.510±0.00 1.036±0.06 N/A 0.766±0.37 0.929±0.12 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UW CIL_0008UW_0001 VISTA 4:10015545-10620462
CIL_0001XG CIL_0001XG_0001 CGP 4:10074339-10457410
CIL_0001XH CIL_0001XH_0001 CGP 4:10439874-10684865

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090832 ZNF518B zinc finger protein 518B protein_coding Danio_rerio
ENSMUSG00000046572 Zfp518b zinc finger protein 518B protein_coding Mus_musculus

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