C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 518B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046572 Zfp518b 10090 - 5:38668484-38684826 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057258 Zfp518b-001 38668484-38684750 protein_coding
  ENSMUST00000178760 Zfp518b-003 38674627-38684757 protein_coding
  ENSMUST00000179555 Zfp518b-201 38668484-38684826 protein_coding
  ENSMUST00000180214 Zfp518b-002 38674176-38684826 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057258ENSMUST00000178760ENSMUST00000179555ENSMUST00000180214
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057258 1.531±0.49 0.588±0.17 0.271±0.13 0.940±0.20 0.463±0.00 0.739±0.11 N/A 0.254±0.14 0.148±0.09 N/A 0.463±0.00 1.887±0.38 1.975±1.37 0.381±0.10
ENSMUST00000178760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.206±0.00 N/A N/A
ENSMUST00000179555 0.512±0.05 N/A 0.973±0.07 3.615±2.74 0.652±0.28 0.256±0.00 0.577±0.16 0.475±0.24 0.347±0.12 1.145±0.03 0.485±0.17 1.176±0.51 1.471±0.92 0.302±0.21
ENSMUST00000180214 N/A N/A N/A N/A N/A N/A N/A 0.455±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UW CIL_0008UW_0002 VISTA 5:38299839-38905514
CIL_0001XG CIL_0001XG_0002 CGP 5:38526814-38684826
CIL_0001XH CIL_0001XH_0002 CGP 5:38668484-38876812

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090832 ZNF518B zinc finger protein 518B protein_coding Danio_rerio
ENSG00000178163 ZNF518B zinc finger protein 518B protein_coding Homo_sapiens

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