C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 52
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178821 TMEM52 9606 - 1:1917590-1919273 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310991 TMEM52-001 1917591-1919273 protein_coding
  ENST00000378598 TMEM52-005 1917845-1919258 protein_coding
  ENST00000378602 TMEM52-004 1917590-1918797 protein_coding
  ENST00000416272 TMEM52-002 1918386-1919269 protein_coding
  ENST00000470931 TMEM52-003 1917937-1919270 nonsense_mediated_decay
  ENST00000602604 TMEM52-006 1918099-1919269 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310991ENST00000378598ENST00000378602ENST00000470931ENST00000602604
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310991 0.554±0.00 0.491±0.00 0.175±0.00 0.164±0.00 2.381±2.17 0.800±0.00 0.354±0.00 1.708±0.37 6.463±0.00 0.985±0.00 38.382±0.75 1.890±1.36 0.226±0.03 9.257±0.00
ENST00000378598 N/A N/A N/A 1.112±0.00 N/A N/A N/A N/A N/A N/A N/A 4.002±0.00 0.353±0.18 6.786±0.00
ENST00000378602 N/A N/A N/A 0.444±0.00 N/A N/A N/A N/A 1.249±0.00 N/A 6.891±0.00 1.438±0.44 N/A 2.537±0.00
ENST00000470931 N/A N/A N/A N/A N/A 0.455±0.18 0.140±0.00 N/A N/A N/A N/A 0.311±0.00 0.250±0.00 3.211±0.00
ENST00000602604 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.389±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0001 VISTA 1:1910870-2513425

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000023153 Tmem52 transmembrane protein 52 protein_coding Mus_musculus

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