C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 52
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470931 TMEM52-003 ENSG00000178821 9606 - 1:1917937-1919270 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartOvaryPlacentaTestisENST00000470931
Transcript ID Colon Heart Ovary Placenta Testis
ENST00000470931 0.455±0.18 0.140±0.00 0.311±0.00 0.250±0.00 3.211±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QV CIL_0007QV_0001 VISTA 1:1910870-2513425

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131599 Tmem52-002 retained_intron Mus_musculus 0 383
ENSMUST00000178238 Tmem52-202 protein_coding Mus_musculus 0 379
ENSMUST00000145796 Tmem52-003 retained_intron Mus_musculus 0 357
ENSMUST00000023920 Tmem52-001 protein_coding Mus_musculus 0 357

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