C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apolipoprotein L domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178878 APOLD1 9606 + 12:12725917-12829975 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326765 APOLD1-001 12725931-12791466 protein_coding
  ENST00000356591 APOLD1-002 12785607-12791466 protein_coding
  ENST00000534843 APOLD1-005 12725929-12829975 nonsense_mediated_decay
  ENST00000540583 APOLD1-004 12725917-12814199 nonsense_mediated_decay
  ENST00000588943 APOLD1-003 12726026-12812650 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326765ENST00000356591
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326765 299.633±0.00 11.643±0.00 1.574±0.00 13.427±0.00 22.281±0.00 13.580±11.73 8.124±6.25 1.999±1.42 2.295±0.00 10.467±0.00 9.202±0.00 4.223±1.85 9.594±0.00 2.646±0.07
ENST00000356591 N/A N/A 0.840±0.00 3.433±0.00 9.755±0.00 N/A 2.878±0.00 2.153±0.00 9.132±0.00 2.562±0.00 4.835±0.00 3.957±0.63 29.831±13.45 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KD CIL_0000KD_0001 CGP 12:12715058-12829975
CIL_0003H5 CIL_0003H5_0001 CGP 12:12725917-12829981

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001666 IEA response to hypoxia
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0006869 IEA lipid transport
GO:0008289 IEA lipid binding
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0042118 IEA endothelial cell activation
GO:0042157 IEA lipoprotein metabolic process
GO:0045601 IEA regulation of endothelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007425 apol1 apolipoprotein L, 1 protein_coding Danio_rerio
ENSDARG00000023185 APOLD1 (2 of 4) apolipoprotein L domain containing 1 protein_coding Danio_rerio
ENSDARG00000068030 APOLD1 (3 of 4) apolipoprotein L domain containing 1 protein_coding Danio_rerio
ENSDARG00000089961 APOLD1 (4 of 4) apolipoprotein L domain containing 1 protein_coding Danio_rerio
ENSMUSG00000090698 Apold1 apolipoprotein L domain containing 1 protein_coding Mus_musculus

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