C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein L domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000326765 APOLD1-001 ENSG00000178878 9606 + 12:12725931-12791466 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326765
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326765 299.633±0.00 11.643±0.00 1.574±0.00 13.427±0.00 22.281±0.00 13.580±11.73 8.124±6.25 1.999±1.42 2.295±0.00 10.467±0.00 9.202±0.00 4.223±1.85 9.594±0.00 2.646±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KD CIL_0000KD_0001 CGP 12:12715058-12829975
CIL_0003H5 CIL_0003H5_0001 CGP 12:12725917-12829981

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001666 IEA response to hypoxia
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0006869 IEA lipid transport
GO:0008289 IEA lipid binding
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0042118 IEA endothelial cell activation
GO:0042157 IEA lipoprotein metabolic process
GO:0045601 IEA regulation of endothelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000007 58

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