C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and BTB domain containing 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179456 ZBTB18 9606 + 1:244048939-244057476 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358704 ZBTB18-001 244051283-244057476 protein_coding
  ENST00000622512 ZBTB18-201 244048939-244057472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358704ENST00000622512
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358704 N/A 0.408±0.00 13.009±0.00 1.044±0.32 N/A N/A 1.742±0.09 0.781±0.26 2.735±0.00 2.447±0.00 0.387±0.00 0.577±0.23 N/A
ENST00000622512 5.121±0.00 3.792±0.00 20.903±0.00 3.659±1.41 2.333±1.94 3.738±2.63 4.495±0.00 1.883±0.10 5.875±0.00 20.913±0.00 2.080±0.62 1.504±0.70 16.364±3.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JP CIL_0007JP_0001 UCNEbase 1:243392857-244066424
CIL_0006TV CIL_0006TV_0001 CGP 1:243488233-244057476
CIL_0008ST CIL_0008ST_0001 VISTA 1:243754023-244355124
CIL_0006TU CIL_0006TU_0001 CGP 1:244048939-244389663

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000228 TAS nuclear chromosome
GO:0001701 IEA in utero embryonic development
GO:0003677 TAS DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007519 ISS skeletal muscle tissue development
GO:0015630 IDA microtubule cytoskeleton
GO:0021549 IEA cerebellum development
GO:0021766 IEA hippocampus development
GO:0021987 IEA cerebral cortex development
GO:0043565 IDA sequence-specific DNA binding
GO:0045171 IDA intercellular bridge
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048666 IEA neuron development
GO:0048872 IEA homeostasis of number of cells
GO:0051302 IEA regulation of cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028228 zbtb18 zinc finger and BTB domain containing 18 protein_coding Danio_rerio
ENSMUSG00000063659 Zbtb18 zinc finger and BTB domain containing 18 protein_coding Mus_musculus

Loading