C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006TV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000117020-ENSG00000179456 CGP 9606 1:243488233-244057476
GeneTranscriptPositionBiotype
ENSG00000054282 (SDCCAG8)
serologically defined colon cancer antigen 8 		ENST00000366541 (SDCCAG8-001) 243256056-243500092 protein_coding
ENST00000435549 (SDCCAG8-002) 243286383-243500091 protein_coding
ENST00000463012 (SDCCAG8-008) 243307784-243316895 processed_transcript
ENST00000463042 (SDCCAG8-009) 243418017-243476364 processed_transcript
ENST00000476722 (SDCCAG8-003) 243286354-243306548 protein_coding
ENST00000482234 (SDCCAG8-011) 243271025-243305087 processed_transcript
ENST00000490065 (SDCCAG8-006) 243256034-243286397 processed_transcript
ENST00000491888 (SDCCAG8-005) 243269136-243271032 processed_transcript
ENST00000493334 (SDCCAG8-004) 243338753-243415829 processed_transcript
ENST00000496361 (SDCCAG8-007) 243293118-243305557 processed_transcript
ENST00000497459 (SDCCAG8-010) 243487815-243500089 processed_transcript
ENSG00000117020 (AKT3)
v-akt murine thymoma viral oncogene homolog 3 		ENST00000263826 (AKT3-201) 243499720-243843282 protein_coding
ENST00000336199 (AKT3-002) 243488233-243843236 protein_coding
ENST00000366539 (AKT3-001) 243501763-243850128 protein_coding
ENST00000366540 (AKT3-007) 243499719-243843584 protein_coding
ENST00000463991 (AKT3-003) 243664772-243814682 processed_transcript
ENST00000490018 (AKT3-004) 243695591-243818174 processed_transcript
ENST00000491219 (AKT3-005) 243687437-243695716 processed_transcript
ENST00000492957 (AKT3-006) 243612483-243615146 processed_transcript
ENST00000550388 (AKT3-009) 243735664-243814730 processed_transcript
ENST00000552631 (AKT3-008) 243645905-243851079 protein_coding
ENSG00000179456 (ZBTB18)
zinc finger and BTB domain containing 18 		ENST00000358704 (ZBTB18-001) 244051283-244057476 protein_coding
ENST00000622512 (ZBTB18-201) 244048939-244057472 protein_coding
ENSG00000226766 (FABP7P1)
fatty acid binding protein 7, brain pseudogene 1 		ENST00000424004 (FABP7P1-001) 243624666-243625056 processed_pseudogene
ENSG00000226828 (RP11-278H7.1)
 ENST00000440494 (RP11-278H7.1-001) 243917402-244047317 lincRNA
ENSG00000228939 (AKT3-IT1)
AKT3 intronic transcript 1 (non-protein coding) 		ENST00000417120 (AKT3-IT1-001) 243793205-243794400 sense_intronic
CIL_0006TV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019699-ENSMUSG00000063659 CGP 10090 1:177020073-177450760
GeneTranscriptPositionBiotype
ENSMUSG00000026504 (Sdccag8)
serologically defined colon cancer antigen 8 		ENSMUST00000027785 (Sdccag8-001) 176814660-177020437 protein_coding
ENSMUST00000056773 (Sdccag8-005) 176814660-176862127 protein_coding
ENSMUST00000123409 (Sdccag8-003) 176814660-177020437 nonsense_mediated_decay
ENSMUST00000133305 (Sdccag8-004) 176814660-176956360 retained_intron
ENSMUST00000139589 (Sdccag8-006) 176998009-177020437 processed_transcript
ENSMUST00000150429 (Sdccag8-002) 176814660-176845497 retained_intron
ENSMUSG00000063659 (Zbtb18)
zinc finger and BTB domain containing 18 		ENSMUST00000077225 (Zbtb18-201) 177445821-177450760 protein_coding
ENSMUST00000094276 (Zbtb18-202) 177444661-177450760 protein_coding
ENSMUSG00000097892 (Gm26801)
predicted gene, 26801 		ENSMUST00000180591 (Gm26801-201) 177429047-177443270 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TV_0001ENSG00000054282ENST00000366541ENST00000435549ENST00000463012ENST00000463042ENST00000476722ENST00000482234ENST00000490065ENST00000491888ENST00000493334ENST00000496361ENST00000497459ENSG00000117020ENST00000263826ENST00000336199ENST00000366539ENST00000366540ENST00000463991ENST00000490018ENST00000491219ENST00000492957ENST00000550388ENST00000552631ENSG00000179456ENST00000358704ENST00000622512ENSG00000226766ENST00000424004ENSG00000226828ENST00000440494ENSG00000228939ENST00000417120CIL_0006TV_0002ENSMUSG00000026504ENSMUST00000027785ENSMUST00000056773ENSMUST00000123409ENSMUST00000133305ENSMUST00000139589ENSMUST00000150429ENSMUSG00000063659ENSMUST00000077225ENSMUST00000094276ENSMUSG00000097892ENSMUST00000180591
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006TV_0001ENSG00000054282ENST00000366541ENST00000476722ENST00000490065ENSG00000117020ENST00000263826ENST00000366539ENST00000366540ENSG00000179456ENST00000358704ENST00000622512ENSG00000226766ENST00000424004ENSG00000226828ENST00000440494ENSG00000228939ENST00000417120CIL_0006TV_0002ENSMUSG00000026504ENSMUST00000027785ENSMUST00000056773ENSMUST00000133305ENSMUST00000139589ENSMUSG00000063659ENSMUST00000077225ENSMUST00000094276ENSMUSG00000097892ENSMUST00000180591
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000054282 ENST00000366541 N/A 3.721±0.00 2.462±0.00 N/A 4.070±0.68 2.497±0.00 1.954±0.32 1.153±0.00 3.512±2.23 7.163±0.00 1.842±0.85 2.699±1.84 3.155±0.76 N/A
ENST00000435549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.558±0.00 N/A N/A N/A
ENST00000482234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.365±0.00 N/A N/A N/A
ENST00000491888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000117020 ENST00000263826 12.115±0.00 3.330±0.00 N/A 8.815±0.00 3.571±1.63 11.783±0.00 1.660±1.08 4.851±0.00 1.081±0.00 6.180±1.08 0.389±0.00 6.020±2.39 4.900±1.69 7.551±0.50
ENST00000336199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366539 3.782±0.00 N/A 1.523±0.00 7.025±0.00 2.111±0.00 4.261±2.37 1.059±0.18 1.596±1.24 9.242±0.00 4.264±0.00 0.947±0.00 2.149±0.08 0.909±0.00 4.660±1.83
ENST00000366540 N/A N/A 4.801±0.00 111.801±0.00 10.799±0.00 N/A 3.225±0.00 1.575±0.00 14.113±0.00 11.719±0.00 N/A 10.781±0.00 N/A N/A
ENST00000463991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179456 ENST00000358704 N/A 0.408±0.00 N/A 13.009±0.00 1.044±0.32 N/A N/A 1.742±0.09 0.781±0.26 2.735±0.00 2.447±0.00 0.387±0.00 0.577±0.23 N/A
ENST00000622512 5.121±0.00 3.792±0.00 N/A 20.903±0.00 3.659±1.41 2.333±1.94 3.738±2.63 4.495±0.00 1.883±0.10 5.875±0.00 20.913±0.00 2.080±0.62 1.504±0.70 16.364±3.37
ENSG00000226766 ENST00000424004 0.136±0.00 0.315±0.00 2.267±0.00 0.427±0.09 0.137±0.06 1.392±0.00 0.145±0.04 0.232±0.00 1.735±0.00 1.081±0.00 0.125±0.00 0.605±0.52 0.037±0.00 0.606±0.00
ENSG00000226828 ENST00000440494 N/A 0.015±0.00 N/A 0.138±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.04
ENSG00000228939 ENST00000417120 0.379±0.00 0.999±0.00 2.477±0.00 0.819±0.00 1.780±0.00 0.576±0.18 0.049±0.00 0.193±0.00 0.528±0.00 0.472±0.18 N/A 0.656±0.48 0.076±0.00 0.376±0.30
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026504 ENSMUST00000027785 1.949±0.00 1.486±0.17 3.845±0.13 N/A 1.954±0.29 1.064±0.01 1.005±0.15 1.502±0.25 1.136±0.57 N/A 2.437±0.31 2.800±2.08 5.764±5.12 25.333±36.81
ENSMUST00000056773 N/A 2.644±0.00 N/A N/A N/A 1.147±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133305 N/A N/A N/A N/A N/A N/A N/A N/A 0.330±0.12 N/A N/A N/A N/A 2.311±0.44
ENSMUST00000139589 N/A N/A N/A N/A N/A N/A N/A 6.697±0.87 N/A N/A N/A 5.303±0.00 N/A N/A
ENSMUST00000150429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063659 ENSMUST00000077225 0.590±0.01 N/A N/A 1.781±0.10 0.358±0.00 0.595±0.00 N/A N/A 0.501±0.09 N/A N/A 1.343±0.55 0.407±0.06 N/A
ENSMUST00000094276 1.240±0.59 3.404±1.68 N/A 12.168±5.50 3.678±0.69 3.091±2.52 2.122±1.12 3.171±1.11 1.769±0.50 3.927±3.15 10.527±10.39 3.361±1.45 1.259±0.83 2.229±0.46
ENSMUSG00000097892 ENSMUST00000180591 0.160±0.00 N/A 1.212±0.00 0.477±0.40 N/A N/A N/A N/A 0.040±0.00 N/A 0.084±0.00 N/A 0.012±0.00 N/A

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