C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and BTB domain containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622512 ZBTB18-201 ENSG00000179456 9606 + 1:244048939-244057472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000622512
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000622512 5.121±0.00 3.792±0.00 20.903±0.00 3.659±1.41 2.333±1.94 3.738±2.63 4.495±0.00 1.883±0.10 5.875±0.00 20.913±0.00 2.080±0.62 1.504±0.70 16.364±3.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JP CIL_0007JP_0001 UCNEbase 1:243392857-244066424
CIL_0006TV CIL_0006TV_0001 CGP 1:243488233-244057476
CIL_0008ST CIL_0008ST_0001 VISTA 1:243754023-244355124
CIL_0006TU CIL_0006TU_0001 CGP 1:244048939-244389663

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000228 TAS nuclear chromosome
GO:0003677 TAS DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007519 ISS skeletal muscle tissue development
GO:0015630 IDA microtubule cytoskeleton
GO:0043565 IDA sequence-specific DNA binding
GO:0045171 IDA intercellular bridge
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077225 Zbtb18-201 protein_coding Mus_musculus 0 5264
ENSMUST00000094276 Zbtb18-202 protein_coding Mus_musculus 0 5264
ENSDART00000138312 zbtb18-001 protein_coding Danio_rerio 0 462

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