C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 17 (vesicular glutamate transporter), member 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179520 SLC17A8 9606 + 12:100357079-100422059 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323346 SLC17A8-001 100357079-100422059 protein_coding
  ENST00000392989 SLC17A8-002 100357368-100420252 protein_coding
  ENST00000547922 SLC17A8-004 100402618-100404380 retained_intron
  ENST00000552697 SLC17A8-003 100410621-100420089 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverOvaryPlacentaTestisENST00000323346ENST00000392989ENST00000547922ENST00000552697
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000323346 0.003±0.00 0.012±0.00 0.247±0.06 N/A 0.005±0.00 N/A N/A 0.040±0.00 0.130±0.09 0.060±0.00
ENST00000392989 N/A N/A 0.511±0.00 0.030±0.00 N/A 0.143±0.00 0.042±0.00 0.018±0.00 N/A 0.063±0.00
ENST00000547922 N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A
ENST00000552697 N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A 0.111±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BW CIL_0006BW_0002 CGP 12:100357079-100564413

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005313 IEA L-glutamate transmembrane transporter activity
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006836 IEA neurotransmitter transport
GO:0007605 IEA sensory perception of sound
GO:0015293 IEA symporter activity
GO:0015813 IEA L-glutamate transport
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030672 TAS synaptic vesicle membrane
GO:0043005 IEA neuron projection
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057728 slc17a8 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8 protein_coding Danio_rerio
ENSMUSG00000019935 Slc17a8 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8 protein_coding Mus_musculus

Loading