C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 17 (vesicular glutamate transporter), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323346 SLC17A8-001 ENSG00000179520 9606 + 12:100357079-100422059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartOvaryPlacentaTestisENST00000323346
Transcript ID Adrenal Bladder Brain Heart Ovary Placenta Testis
ENST00000323346 0.003±0.00 0.012±0.00 0.247±0.06 0.005±0.00 0.040±0.00 0.130±0.09 0.060±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BW CIL_0006BW_0002 CGP 12:100357079-100564413

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005313 IEA L-glutamate transmembrane transporter activity
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006836 IEA neurotransmitter transport
GO:0007605 IEA sensory perception of sound
GO:0015293 IEA symporter activity
GO:0015813 IEA L-glutamate transport
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030672 TAS synaptic vesicle membrane
GO:0043005 IEA neuron projection
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020102 Slc17a8-001 protein_coding Mus_musculus 0 1858
ENSMUST00000105295 Slc17a8-002 protein_coding Mus_musculus 0 1496

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