C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, DHHC-type containing 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000180776 ZDHHC20 9606 - 13:21372573-21459370 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320220 ZDHHC20-201 21376487-21459248 protein_coding
  ENST00000382466 ZDHHC20-202 21372573-21459369 protein_coding
  ENST00000400590 ZDHHC20-001 21376124-21459370 protein_coding
  ENST00000415724 ZDHHC20-203 21378701-21459369 protein_coding
  ENST00000464055 ZDHHC20-002 21376347-21387557 processed_transcript
  ENST00000477811 ZDHHC20-003 21376515-21390254 processed_transcript
  ENST00000484277 ZDHHC20-004 21381434-21381994 processed_transcript
  ENST00000494731 ZDHHC20-006 21376519-21421107 processed_transcript
  ENST00000542645 ZDHHC20-204 21372573-21459370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320220ENST00000382466ENST00000400590ENST00000415724ENST00000477811ENST00000494731ENST00000542645
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320220 N/A 2.531±0.00 N/A N/A N/A 0.806±0.00 N/A 3.831±0.00 N/A N/A N/A N/A N/A
ENST00000382466 2.739±0.00 N/A 1.825±0.80 0.750±0.00 3.622±0.00 N/A 1.871±0.10 2.969±0.00 3.243±1.70 N/A 3.266±1.70 2.737±0.80 4.418±0.00
ENST00000400590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.958±0.00
ENST00000415724 N/A N/A N/A N/A N/A 1.358±0.00 N/A N/A N/A 1.191±0.00 N/A N/A 15.869±0.00
ENST00000477811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.077±0.00
ENST00000494731 N/A N/A 7.665±0.00 N/A N/A N/A N/A 6.885±0.00 N/A N/A 13.238±0.00 7.869±0.00 N/A
ENST00000542645 N/A N/A N/A N/A 2.417±0.00 1.291±0.00 N/A N/A N/A N/A 1.842±0.17 1.481±0.89 2.266±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MB CIL_0004MB_0001 CGP 13:21176645-21459370
CIL_0004ME CIL_0004ME_0001 CGP 13:21372573-21604214

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016409 IDA palmitoyltransferase activity
GO:0018345 IDA protein palmitoylation
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055066 ZDHHC20 (1 of 2) zinc finger, DHHC-type containing 20 protein_coding Danio_rerio
ENSDARG00000058178 ZDHHC20 (2 of 2) zinc finger, DHHC-type containing 20 protein_coding Danio_rerio
ENSMUSG00000021969 Zdhhc20 zinc finger, DHHC domain containing 20 protein_coding Mus_musculus

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