C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004ME_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180776-ENSG00000165487 CGP 9606 13:21372573-21604214
GeneTranscriptPositionBiotype
ENSG00000165487 (MICU2)
mitochondrial calcium uptake 2 		ENST00000382374 (MICU2-001) 21492700-21604214 protein_coding
ENST00000460488 (MICU2-004) 21492937-21503098 processed_transcript
ENST00000468222 (MICU2-002) 21510083-21604181 protein_coding
ENST00000469058 (MICU2-005) 21510027-21604165 processed_transcript
ENST00000476895 (MICU2-006) 21510027-21603711 processed_transcript
ENST00000478700 (MICU2-003) 21493104-21496652 processed_transcript
ENST00000479790 (MICU2-008) 21492691-21503073 processed_transcript
ENST00000480341 (MICU2-007) 21502827-21515661 processed_transcript
ENSG00000180776 (ZDHHC20)
zinc finger, DHHC-type containing 20 		ENST00000320220 (ZDHHC20-201) 21376487-21459248 protein_coding
ENST00000382466 (ZDHHC20-202) 21372573-21459369 protein_coding
ENST00000400590 (ZDHHC20-001) 21376124-21459370 protein_coding
ENST00000415724 (ZDHHC20-203) 21378701-21459369 protein_coding
ENST00000464055 (ZDHHC20-002) 21376347-21387557 processed_transcript
ENST00000477811 (ZDHHC20-003) 21376515-21390254 processed_transcript
ENST00000484277 (ZDHHC20-004) 21381434-21381994 processed_transcript
ENST00000494731 (ZDHHC20-006) 21376519-21421107 processed_transcript
ENST00000542645 (ZDHHC20-204) 21372573-21459370 protein_coding
ENSG00000226908 (HIST1H2BPS3)
HIST1H2B pseudogene 3 		ENST00000419683 (HIST1H2BPS3-001) 21483834-21484174 processed_pseudogene
ENSG00000230022 (FNTAP2)
farnesyltransferase, CAAX box, alpha pseudogene 2 		ENST00000430308 (FNTAP2-001) 21530690-21531323 processed_pseudogene
ENSG00000236953 (ZDHHC20-IT1)
ZDHHC20 intronic transcript 1 (non-protein coding) 		ENST00000417513 (ZDHHC20-IT1-001) 21376977-21377874 sense_intronic
CIL_0004ME_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021969-ENSMUSG00000021973 CGP 10090 14:57832702-57999262
GeneTranscriptPositionBiotype
ENSMUSG00000021969 (Zdhhc20)
zinc finger, DHHC domain containing 20 		ENSMUST00000089473 (Zdhhc20-201) 57832702-57890262 protein_coding
ENSMUSG00000021973 (Micu2)
mitochondrial calcium uptake 2 		ENSMUST00000022543 (Micu2-201) 57916280-57999262 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ME_0001ENSG00000165487ENST00000382374ENST00000460488ENST00000468222ENST00000469058ENST00000476895ENST00000478700ENST00000479790ENST00000480341ENSG00000180776ENST00000320220ENST00000382466ENST00000400590ENST00000415724ENST00000464055ENST00000477811ENST00000484277ENST00000494731ENST00000542645ENSG00000226908ENST00000419683ENSG00000230022ENST00000430308ENSG00000236953ENST00000417513CIL_0004ME_0002ENSMUSG00000021969ENSMUST00000089473ENSMUSG00000021973ENSMUST00000022543
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004ME_0001ENSG00000165487ENST00000382374ENST00000460488ENST00000468222ENST00000469058ENST00000478700ENST00000479790ENSG00000180776ENST00000320220ENST00000382466ENST00000400590ENST00000415724ENST00000477811ENST00000494731ENST00000542645ENSG00000226908ENST00000419683ENSG00000230022ENST00000430308ENSG00000236953ENST00000417513CIL_0004ME_0002ENSMUSG00000021969ENSMUST00000089473ENSMUSG00000021973ENSMUST00000022543
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165487 ENST00000382374 7.257±0.00 13.973±0.00 2.265±0.00 8.386±2.70 8.790±2.59 6.513±0.48 13.567±8.43 14.270±11.52 5.501±3.08 5.876±0.67 5.103±2.94 13.449±3.47 8.149±0.80 15.118±4.32
ENST00000460488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.599±0.00 10.152±0.00 11.736±0.00
ENST00000468222 N/A N/A N/A N/A N/A N/A N/A N/A 4.070±0.00 N/A 4.832±0.00 N/A N/A N/A
ENST00000469058 N/A N/A 1.824±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478700 N/A N/A 2.060±0.00 N/A N/A N/A N/A 1.400±0.00 N/A 1.854±0.00 1.000±0.00 12.448±0.00 N/A 13.060±0.00
ENST00000479790 N/A N/A N/A N/A N/A N/A N/A 1.159±0.00 0.735±0.00 N/A N/A 5.998±0.00 N/A N/A
ENST00000480341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180776 ENST00000320220 N/A N/A 2.531±0.00 N/A N/A N/A 0.806±0.00 N/A 3.831±0.00 N/A N/A N/A N/A N/A
ENST00000382466 N/A 2.739±0.00 N/A 1.825±0.80 0.750±0.00 3.622±0.00 N/A 1.871±0.10 2.969±0.00 3.243±1.70 N/A 3.266±1.70 2.737±0.80 4.418±0.00
ENST00000400590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.958±0.00
ENST00000415724 N/A N/A N/A N/A N/A N/A 1.358±0.00 N/A N/A N/A 1.191±0.00 N/A N/A 15.869±0.00
ENST00000464055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.077±0.00
ENST00000484277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494731 N/A N/A N/A 7.665±0.00 N/A N/A N/A N/A 6.885±0.00 N/A N/A 13.238±0.00 7.869±0.00 N/A
ENST00000542645 N/A N/A N/A N/A N/A 2.417±0.00 1.291±0.00 N/A N/A N/A N/A 1.842±0.17 1.481±0.89 2.266±0.00
ENSG00000226908 ENST00000419683 N/A 0.795±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00
ENSG00000230022 ENST00000430308 N/A N/A 0.325±0.00 0.129±0.00 N/A N/A N/A 0.094±0.00 N/A N/A N/A 0.044±0.00 0.071±0.00 0.118±0.07
ENSG00000236953 ENST00000417513 1.689±0.00 6.205±0.00 N/A 2.629±0.00 0.555±0.00 1.388±0.00 0.270±0.00 1.082±0.00 0.521±0.00 0.608±0.00 0.073±0.00 1.515±1.14 0.283±0.15 1.205±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021969 ENSMUST00000089473 4.391±2.29 12.557±3.17 7.414±2.13 5.777±1.91 5.088±2.58 7.666±1.14 1.072±0.38 2.627±0.62 2.130±0.70 6.995±3.23 0.395±0.21 8.677±2.18 6.186±2.85 2.548±1.07
ENSMUSG00000021973 ENSMUST00000022543 12.817±4.58 45.062±2.42 17.860±0.92 10.216±5.20 15.415±8.16 31.731±12.18 12.523±1.53 14.618±2.23 11.682±2.21 17.437±9.86 12.771±1.07 23.840±7.84 13.151±2.63 4.652±0.56

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